RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 TRIM44Q96DX7 344 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-206ENST00000588860 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 DNAJC25Q9H1X3 360 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 RRAGCQ9HB90 399 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 VAT1LQ9HCJ6 419 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 PRDM10Q9NQV6 1147 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 BARHL2Q9NY43 387 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 FAM13BQ9NYF5 915 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 ZNF70Q9UC06 446 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-206ENST00000588860 HPSEQ9Y251 543 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 SBF1O95248 1867 aa10.02□□□□□ -0.81
SMAD4-206ENST00000588860 FAM237AA0A1B0GTK4 181 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 CCDC194A0A1B0GVG4 234 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 GDF11O95390 407 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 GRIN1Q05586 938 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 ZNF543Q08ER8 600 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 ABCB5Q2M3G0 1257 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 SHROOM1Q2M3G4 852 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-206ENST00000588860 SPECC1Q5M775 1068 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 CIAPIN1Q6FI81 312 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 GALNT17Q6IS24 598 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 TYW1BQ6NUM6 668 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 TATDN1Q6P1N9 297 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 FAM177A1Q8N128 213 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-206ENST00000588860 AGBL3Q8NEM8 1001 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 RASGRP4Q8TDF6 673 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 CCDC12Q8WUD4 166 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-206ENST00000588860 ERCC4Q92889 916 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-206ENST00000588860 TIGD1Q96MW7 591 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 PIGSQ96S52 555 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 CSRNP1Q96S65 589 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 CBX8Q9HC52 389 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 USP25Q9UHP3 1055 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 KCNH3Q9ULD8 1083 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 PCDHA6Q9UN73 950 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 PCDHA8Q9Y5H6 950 aa10.01□□□□□ -0.81
SMAD4-206ENST00000588860 SRPRBQ9Y5M8 271 aaKnown RBP10.01□□□□□ -0.81
SMAD4-206ENST00000588860 MORC2Q9Y6X9 1032 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-206ENST00000588860 WNT7AO00755 349 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 RAD21O60216 631 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 CAVIN2O95810 425 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 SNHG28P0DPA3 235 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 EEF2P13639 858 aaKnown RBP10□□□□□ -0.81
SMAD4-206ENST00000588860 TRAPPC10P48553 1259 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 ICA1Q05084 483 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 CXCL9Q07325 125 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 SEPT2Q15019 361 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 ZRSR1Q15695 479 aaKnown RBP10□□□□□ -0.81
SMAD4-206ENST00000588860 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
SMAD4-206ENST00000588860 ARHGAP27Q6ZUM4 889 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 C11orf57Q6ZUT1 292 aaPredicted RBP10□□□□□ -0.81
SMAD4-206ENST00000588860 TMEM179Q6ZVK1 233 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 METTL16Q86W50 562 aaKnown RBP10□□□□□ -0.81
SMAD4-206ENST00000588860 DCAF4Q8WV16 495 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 JDP2Q8WYK2 163 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 FERMT2Q96AC1 680 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
SMAD4-206ENST00000588860 ABHD8Q96I13 439 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 PDLIM2Q96JY6 352 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 CSRNP2Q9H175 543 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 RIOX1Q9H6W3 641 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 KANSL2Q9H9L4 492 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10□□□□□ -0.81
SMAD4-206ENST00000588860 VEZTQ9HBM0 779 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 C6orf50Q9HD87 102 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 ANO10Q9NW15 660 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 BCS1LQ9Y276 419 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 CNTNAP1P78357 1384 aa10□□□□□ -0.81
SMAD4-206ENST00000588860 SMCHD1A6NHR9 2005 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 A0A087WWV3 80 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 SMCO2A6NFE2 343 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 hCG_1984214I3L0E3 225 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 M0R2N6 131 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 NFKBIEO00221 500 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 FOXN1O15353 648 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 GH2P01242 217 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 MCM7P33993 719 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 RGS19P49795 217 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 ZNF165P49910 485 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 ATP2C1P98194 919 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-206ENST00000588860 PLCB2Q00722 1185 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 RASSF7Q02833 373 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 TNIP1Q15025 636 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
SMAD4-206ENST00000588860 SLFN13Q68D06 897 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 TTBK2Q6IQ55 1244 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 KCTD1Q719H9 257 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 LUZP1Q86V48 1076 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 CEP57L1Q8IYX8 460 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 ZNF713Q8N859 430 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-206ENST00000588860 MTMR14Q8NCE2 650 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 FAM151AQ8WW52 585 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 NYAP2Q9P242 653 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 KIAA1468Q9P260 1216 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 DOCK1Q14185 1865 aa9.99□□□□□ -0.81
SMAD4-206ENST00000588860 POLR2AP24928 1970 aaKnown RBP9.99□□□□□ -0.81
SMAD4-206ENST00000588860 PNMA6FA0A0J9YX94 578 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 ESYT2A0FGR8 921 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 MYO1BO43795 1136 aa9.98□□□□□ -0.81
SMAD4-206ENST00000588860 ECM2O94769 699 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms