RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 NUP88Q99567 741 aaPredicted RBP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 ESYT1Q9BSJ8 1104 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 MTRF1O75570 445 aaKnown RBP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 ITIH3Q06033 890 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 NMIQ13287 307 aaPredicted RBP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 MTX1Q13505 466 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 RCN2Q14257 317 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 ST13P4Q8IZP2 240 aaPredicted RBP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 CEP295NLQ96MC4 621 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 KRT75O95678 551 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 AK2P54819 239 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 XRCC4Q13426 336 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 HSP90AA5PQ58FG0 334 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 RNF220Q5VTB9 566 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 NLRP9Q7RTR0 991 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 WAPLQ7Z5K2 1190 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 C14orf80Q86SX3 495 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 SLC35F6Q8N357 371 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 GABPB2Q8TAK5 448 aaPredicted RBP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 ATP6V1E2Q96A05 226 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 TMEM110-MUSTN1A8MSY1 372 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 DDHD2O94830 711 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 PRPF6O94906 941 aaKnown RBP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 TRIM37O94972 964 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 BPIFB4P59827 614 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 ZMYM1Q5SVZ6 1142 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 WDR93Q6P2C0 686 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 MAEAQ7L5Y9 396 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 CNKSR1Q969H4 720 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 IQCDQ96DY2 449 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 LRRC27Q9C0I9 530 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 PIDD1Q9HB75 910 aa8.55□□□□□ -1.04
LAMA3-210ENST00000588770 DIS3Q9Y2L1 958 aaKnown RBP8.55□□□□□ -1.04
LAMA3-210ENST00000588770 EIF4G1Q04637 1599 aaKnown RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 CCDC141Q6ZP82 1450 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 WDR46O15213 610 aaKnown RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 KRT4P19013 534 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 USP14P54578 494 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 PSMD6Q15008 389 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 DEPTORQ8TB45 409 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 ZNF570Q96NI8 536 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 SLC12A5Q9H2X9 1139 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 C9orf78Q9NZ63 289 aaPredicted RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 PLAAQ9Y263 795 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 STAM2O75886 525 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 EVA1CP58658 441 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 TNIP1Q15025 636 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 FAM186BQ8IYM0 893 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 FBXO41Q8TF61 875 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 LENG1Q96BZ8 264 aaPredicted RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 DYDC2Q96IM9 177 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 GUCA1BQ9UMX6 200 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 AQRO60306 1485 aaKnown RBP eCLIP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 B3GALNT1O75752 331 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 GHRP10912 638 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 CPA1P15085 419 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 EPHB4P54760 987 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 POLR2FP61218 127 aaKnown RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 SKOR1P84550 965 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 GOLGA8FQ08AF8 430 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 GOLGA8DPQ0D2H9 430 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 TBC1D10BQ4KMP7 808 aaPredicted RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 GSPT2Q8IYD1 628 aaKnown RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 DCLK2Q8N568 766 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 SH2D3CQ8N5H7 860 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 IRF2BPLQ9H1B7 796 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 PLCB1Q9NQ66 1216 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 PPP1R9AQ9ULJ8 1098 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 MTMR6Q9Y217 621 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 HTR3EA5X5Y0 456 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 A6NHS1 94 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 CYP27B1O15528 508 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 ADCY3O60266 1144 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 FUT4P22083 530 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 MCL1Q07820 350 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 DPY19L2Q6NUT2 758 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 OTUD7AQ8TE49 926 aaPredicted RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 RNPC3Q96LT9 517 aaKnown RBP8.54□□□□□ -1.04
LAMA3-210ENST00000588770 ARHGEF38Q9NXL2 777 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 SLC5A4Q9NY91 659 aa8.54□□□□□ -1.04
LAMA3-210ENST00000588770 LINC00854A0A1B0GVQ3 168 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 GSPT1P15170 499 aaKnown RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 FLOT2Q14254 428 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 CNGA3Q16281 694 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 C6orf183Q5T699 404 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 SCUBE1Q8IWY4 988 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 CDC5LQ99459 802 aaKnown RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 SAR1BQ9Y6B6 198 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 RGS12O14924 1447 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 AKR1B15C9JRZ8 316 aaPredicted RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 ZWINTO95229 277 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 TUBA4AP68366 448 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 RIPK1Q13546 671 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 NCAPH2Q6IBW4 605 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 CLIP3Q96DZ5 547 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 CCDC43Q96MW1 224 aaKnown RBP8.53□□□□□ -1.04
LAMA3-210ENST00000588770 TTC1Q99614 292 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 SELENOSQ9BQE4 189 aa8.53□□□□□ -1.04
LAMA3-210ENST00000588770 OXCT2Q9BYC2 517 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms