RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	PDHB	P11177	359 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	CD44	P16070	742 aa	Known RBP	19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	MTR	Q99707	1265 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	GTPBP4	Q9BZE4	634 aa	Known RBP	19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	AKR1B1	P15121	316 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	CDC25A	P30304	524 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	CUL4B	Q13620	913 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	HHIPL2	Q6UWX4	724 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	PKNOX2	Q96KN3	472 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	TMEM60	Q9H2L4	133 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652	SERPINB13	Q9UIV8	391 aa		19.84	■□□□□ 0.77
ERCC2-211	ENST00000588652		G3V3G9	751 aa		19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	STX10	O60499	249 aa		19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	ADK	P55263	362 aa	Known RBP	19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	NR1I3	Q14994	352 aa		19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	DCAF8	Q5TAQ9	597 aa		19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	MSL1	Q68DK7	614 aa		19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	DTHD1	Q6ZMT9	781 aa		19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	PIGS	Q96S52	555 aa		19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	SEC63	Q9UGP8	760 aa	Known RBP	19.83	■□□□□ 0.77
ERCC2-211	ENST00000588652	IGKV6D-41	A0A0C4DH26	115 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652		A0A1B0GTH6	734 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	SMCO2	A6NFE2	343 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	TXLNA	P40222	546 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	APOBEC3H	Q6NTF7	200 aa	Known RBP	19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	CDC42EP5	Q6NZY7	148 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	TEKT1	Q969V4	418 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	UBA5	Q9GZZ9	404 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	RIOX1	Q9H6W3	641 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	VAT1L	Q9HCJ6	419 aa		19.83	■□□□□ 0.76
ERCC2-211	ENST00000588652	H2AFX	P16104	143 aa	Predicted RBP	19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	GNA11	P29992	359 aa		19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	ZNF622	Q969S3	477 aa	Known RBP eCLIP	19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	BLZF1	Q9H2G9	400 aa		19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	C6orf50	Q9HD87	102 aa		19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	ZNF772	Q68DY9	489 aa	Predicted RBP	19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	KLHL10	Q6JEL2	608 aa		19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	APTX	Q7Z2E3	356 aa	Known RBP	19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	KRT25	Q7Z3Z0	450 aa		19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	PODN	Q7Z5L7	613 aa		19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	SMYD4	Q8IYR2	804 aa	Predicted RBP	19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	FAM53C	Q9NYF3	392 aa		19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	SWAP70	Q9UH65	585 aa		19.82	■□□□□ 0.76
ERCC2-211	ENST00000588652	SYNRG	Q9UMZ2	1314 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	PPP1R3G	B7ZBB8	358 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	LAD1	O00515	517 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	GTPBP6	O43824	516 aa	Predicted RBP	19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	KARS	Q15046	597 aa	Known RBP	19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	SPATA1	Q5VX52	437 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	TOGARAM2	Q6ZUX3	1019 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	LRRC47	Q8N1G4	583 aa	Known RBP	19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	DBNDD1	Q9H9R9	158 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	DISC1	Q9NRI5	854 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	FRMPD2	Q68DX3	1309 aa	Predicted RBP	19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	MYO3B	Q8WXR4	1341 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	SNHG28	P0DPA3	235 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	EIF6	P56537	245 aa	Known RBP	19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	CLEC10A	Q8IUN9	316 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	KCNQ5	Q9NR82	932 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	ZNF446	Q9NWS9	450 aa		19.81	■□□□□ 0.76
ERCC2-211	ENST00000588652	SHMT1	P34896	483 aa		19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	PRPH	P41219	470 aa		19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	STX17	P56962	302 aa		19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	NONO	Q15233	471 aa	Known RBP eCLIP	19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	ASPRV1	Q53RT3	343 aa		19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	GOLGA6L9	A6NEM1	432 aa		19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	URI1	O94763	535 aa	Predicted RBP	19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	TTLL1	O95922	423 aa		19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	STAT6	P42226	847 aa		19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	SOGA3	Q5TF21	947 aa		19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	SRRT	Q9BXP5	876 aa	Known RBP	19.8	■□□□□ 0.76
ERCC2-211	ENST00000588652	ESYT2	A0FGR8	921 aa		19.79	■□□□□ 0.76
ERCC2-211	ENST00000588652	PP2D1	A8MPX8	630 aa		19.79	■□□□□ 0.76
ERCC2-211	ENST00000588652	CRK	P46108	304 aa		19.79	■□□□□ 0.76
ERCC2-211	ENST00000588652	NFIA	Q12857	509 aa		19.79	■□□□□ 0.76
ERCC2-211	ENST00000588652	NAALADL2	Q58DX5	795 aa		19.79	■□□□□ 0.76
ERCC2-211	ENST00000588652	CDKAL1	Q5VV42	579 aa		19.79	■□□□□ 0.76
ERCC2-211	ENST00000588652	C2CD5	Q86YS7	1000 aa		19.79	■□□□□ 0.76
ERCC2-211	ENST00000588652	hCG_1984214	I3L0E3	225 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	TEX33	O43247	280 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	LETM2	Q2VYF4	491 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	KRT222	Q8N1A0	295 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	ZNF713	Q8N859	430 aa	Predicted RBP	19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	CCSER1	Q9C0I3	900 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	GREB1L	Q9C091	1923 aa	Predicted RBP	19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	SCN9A	Q15858	1988 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	C10orf71	Q711Q0	1435 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	HLA-DOA	P06340	250 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	ARHGAP29	Q52LW3	1261 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	NEK8	Q86SG6	692 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	SLX4	Q8IY92	1834 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	MYH4	Q9Y623	1939 aa		19.78	■□□□□ 0.76
ERCC2-211	ENST00000588652	CCNT1	O60563	726 aa	Known RBP	19.77	■□□□□ 0.76
ERCC2-211	ENST00000588652	TADA3	O75528	432 aa		19.77	■□□□□ 0.76
ERCC2-211	ENST00000588652	UBA7	P41226	1012 aa		19.77	■□□□□ 0.76
ERCC2-211	ENST00000588652	REXO1	Q8N1G1	1221 aa	Known RBP	19.77	■□□□□ 0.76
ERCC2-211	ENST00000588652	ZDHHC15	Q96MV8	337 aa		19.77	■□□□□ 0.76
ERCC2-211	ENST00000588652	WDR24	Q96S15	920 aa		19.77	■□□□□ 0.76
ERCC2-211	ENST00000588652	AKR1B15	C9JRZ8	316 aa	Predicted RBP	19.77	■□□□□ 0.76
ERCC2-211	ENST00000588652	RPN1	P04843	607 aa	Known RBP	19.77	■□□□□ 0.76

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