RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 A0A1W2PQ64 194 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 A0A1W2PQD8 194 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 RPN1P04843 607 aaKnown RBP17.18■□□□□ 0.34
PTPRS-206ENST00000588552 IFNAR1P17181 557 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 CYP4A11Q02928 519 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 CALCOCO2Q13137 446 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 hCG_1984214I3L0E3 225 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 PPP6R2O75170 966 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 LIFRP42702 1097 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 OTUD6BQ8N6M0 293 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 ZNF713Q8N859 430 aaPredicted RBP17.18■□□□□ 0.34
PTPRS-206ENST00000588552 CHAMP1Q96JM3 812 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 COL4A3BPQ9Y5P4 624 aa17.18■□□□□ 0.34
PTPRS-206ENST00000588552 K7ENM7 598 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 CUL4AQ13619 759 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 MIGA2Q7L4E1 593 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 FAM178BQ8IXR5 827 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 CTTNBP2NLQ9P2B4 639 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 AGLP35573 1532 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 KCTD2Q14681 263 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 RRAGAQ7L523 313 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 NUCKS1Q9H1E3 243 aaKnown RBP17.17■□□□□ 0.34
PTPRS-206ENST00000588552 PRDM10Q9NQV6 1147 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 STAT2P52630 851 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 SNX16P57768 344 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 UBXN2AP68543 259 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 ZBTB8OSQ8IWT0 167 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 KRT222Q8N1A0 295 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
PTPRS-206ENST00000588552 STMN4Q9H169 189 aaPredicted RBP17.17■□□□□ 0.34
PTPRS-206ENST00000588552 NLRC4Q9NPP4 1024 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 POLR3EQ9NVU0 708 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 SSX2IPQ9Y2D8 614 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 MMP1P03956 469 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 CD19P15391 556 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
PTPRS-206ENST00000588552 ARHGAP44Q17R89 818 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 FOXP4Q8IVH2 680 aaPredicted RBP17.17■□□□□ 0.34
PTPRS-206ENST00000588552 IQCDQ96DY2 449 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 PLCD4Q9BRC7 762 aa17.17■□□□□ 0.34
PTPRS-206ENST00000588552 PRPF6O94906 941 aaKnown RBP17.16■□□□□ 0.34
PTPRS-206ENST00000588552 PRDX5P30044 214 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 GTF2F1P35269 517 aaKnown RBP eCLIP17.16■□□□□ 0.346e-6■■□□□ 12.4
PTPRS-206ENST00000588552 LRCH2Q5VUJ6 765 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 CCDC25Q86WR0 208 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 CCDC26Q8TAB7 109 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 GPT2Q8TD30 523 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 SLC39A2Q9NP94 309 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 LARSQ9P2J5 1176 aaKnown RBP17.16■□□□□ 0.34
PTPRS-206ENST00000588552 PRPF3O43395 683 aaKnown RBP17.16■□□□□ 0.34
PTPRS-206ENST00000588552 PPP2R3AQ06190 1150 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 GOLGA5Q8TBA6 731 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 PAIP2Q9BPZ3 127 aaKnown RBP17.16■□□□□ 0.34
PTPRS-206ENST00000588552 KIAA1024Q9UPX6 916 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 LIG4P49917 911 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 LRMPQ12912 555 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 LONRF3Q496Y0 759 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 UBL4BQ8N7F7 174 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 PIK3C2BO00750 1634 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 TUBBP07437 444 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 TXNRD1Q16881 649 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 SYDE2Q5VT97 1194 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 SREK1Q8WXA9 508 aaKnown RBP17.16■□□□□ 0.34
PTPRS-206ENST00000588552 COA7Q96BR5 231 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 LSM14BQ9BX40 385 aaKnown RBP17.16■□□□□ 0.34
PTPRS-206ENST00000588552 CD209Q9NNX6 404 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 RABGAP1Q9Y3P9 1069 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 CPDO75976 1380 aa17.16■□□□□ 0.34
PTPRS-206ENST00000588552 STAMBPO95630 424 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 SLFNL1Q499Z3 407 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 TBCKQ8TEA7 893 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 SLF1Q9BQI6 1058 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 PTPRUQ92729 1446 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 KIF22Q14807 665 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
PTPRS-206ENST00000588552 RNF34Q969K3 372 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 SUGCTQ9HAC7 445 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 FAM47CQ5HY64 1035 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 FAM26FQ5R3K3 315 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 MAGEF1Q9HAY2 307 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 ARMCX3Q9UH62 379 aaPredicted RBP17.15■□□□□ 0.34
PTPRS-206ENST00000588552 H0YCG3 227 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 ZNF577Q9BSK1 485 aa17.15■□□□□ 0.34
PTPRS-206ENST00000588552 CCNA1P78396 465 aa17.14■□□□□ 0.34
PTPRS-206ENST00000588552 TYW1BQ6NUM6 668 aa17.14■□□□□ 0.34
PTPRS-206ENST00000588552 NRBP2Q9NSY0 501 aa17.14■□□□□ 0.34
PTPRS-206ENST00000588552 PLEKHG2Q9H7P9 1386 aa17.14■□□□□ 0.34
PTPRS-206ENST00000588552 MYO3AQ8NEV4 1616 aa17.14■□□□□ 0.34
PTPRS-206ENST00000588552 LARGE1O95461 756 aa17.14■□□□□ 0.33
PTPRS-206ENST00000588552 CRKP46108 304 aa17.14■□□□□ 0.33
PTPRS-206ENST00000588552 RNASE9P60153 205 aaKnown RBP17.14■□□□□ 0.33
PTPRS-206ENST00000588552 FOXO4P98177 505 aa17.14■□□□□ 0.33
PTPRS-206ENST00000588552 NR5A1Q13285 461 aa17.14■□□□□ 0.33
PTPRS-206ENST00000588552 ATP2A2P16615 1042 aaKnown RBP17.14■□□□□ 0.33
PTPRS-206ENST00000588552 OSBPP22059 807 aa17.14■□□□□ 0.33
PTPRS-206ENST00000588552 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
PTPRS-206ENST00000588552 HACE1Q8IYU2 909 aa17.14■□□□□ 0.33
PTPRS-206ENST00000588552 GCFC2P16383 781 aaKnown RBP17.14■□□□□ 0.33
PTPRS-206ENST00000588552 POLGP54098 1239 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms