RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 SEC23AQ15436 765 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 CCDC96Q2M329 555 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 SYDE2Q5VT97 1194 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 CPXCR1Q8N123 301 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 PNMA1Q8ND90 353 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 ZKSCAN3Q9BRR0 538 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 TINF2Q9BSI4 451 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
TPM4-209ENST00000588483 DDX20Q9UHI6 824 aaKnown RBP12.32□□□□□ -0.44
TPM4-209ENST00000588483 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
TPM4-209ENST00000588483 SEPT4O43236 478 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 TRDNQ13061 729 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 TTBK2Q6IQ55 1244 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 NECAB2Q7Z6G3 386 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 PAWRQ96IZ0 340 aaKnown RBP12.31□□□□□ -0.44
TPM4-209ENST00000588483 FGD4Q96M96 766 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 AGBL1Q96MI9 1066 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 UBAC1Q9BSL1 405 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 MTA3Q9BTC8 594 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 MAF1Q9H063 256 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 KAT14Q9H8E8 782 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 RNF146Q9NTX7 359 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 RBM8AQ9Y5S9 174 aaKnown RBP12.31□□□□□ -0.44
TPM4-209ENST00000588483 PFASO15067 1338 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 WDR19Q8NEZ3 1342 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 LCTP09848 1927 aa12.31□□□□□ -0.44
TPM4-209ENST00000588483 E7EWF7 191 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 STOX1Q6ZVD7 989 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 CYB5R4Q7L1T6 521 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 SKAP1Q86WV1 359 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 ANKRD35Q8N283 1001 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 DIS3LQ8TF46 1054 aaKnown RBP12.3□□□□□ -0.44
TPM4-209ENST00000588483 DDX11Q96FC9 970 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 TRERF1Q96PN7 1200 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 A1CFQ9NQ94 594 aaKnown RBP12.3□□□□□ -0.44
TPM4-209ENST00000588483 ISY1Q9ULR0 285 aaKnown RBP12.3□□□□□ -0.44
TPM4-209ENST00000588483 TAF6LQ9Y6J9 622 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 MCM3APO60318 1980 aa12.3□□□□□ -0.44
TPM4-209ENST00000588483 FRMPD2Q68DX3 1309 aaPredicted RBP12.3□□□□□ -0.44
TPM4-209ENST00000588483 LOC102724159A0A0B4J2E5 919 aa12.29□□□□□ -0.44
TPM4-209ENST00000588483 ZNF865P0CJ78 1059 aaPredicted RBP12.29□□□□□ -0.44
TPM4-209ENST00000588483 SLC16A2P36021 539 aa12.29□□□□□ -0.44
TPM4-209ENST00000588483 PWP2Q15269 919 aaKnown RBP12.29□□□□□ -0.44
TPM4-209ENST00000588483 IFIT1BQ5T764 474 aaKnown RBP12.29□□□□□ -0.44
TPM4-209ENST00000588483 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
TPM4-209ENST00000588483 MB21D2Q8IYB1 491 aaPredicted RBP12.29□□□□□ -0.44
TPM4-209ENST00000588483 C11orf49Q9H6J7 331 aa12.29□□□□□ -0.44
TPM4-209ENST00000588483 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
TPM4-209ENST00000588483 CCPG1Q9ULG6 757 aa12.29□□□□□ -0.44
TPM4-209ENST00000588483 MTMR7Q9Y216 660 aa12.29□□□□□ -0.44
TPM4-209ENST00000588483 LRRC37A2A6NM11 1700 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 DNM1LO00429 736 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 SNAI1O95863 264 aaPredicted RBP12.28□□□□□ -0.44
TPM4-209ENST00000588483 NEFLP07196 543 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 ALAS1P13196 640 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 MUM1L1Q5H9M0 696 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 CCDC174Q6PII3 467 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 RALYLQ86SE5 291 aaKnown RBP12.28□□□□□ -0.44
TPM4-209ENST00000588483 CHMP4CQ96CF2 233 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 HOMER2Q9NSB8 354 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 CYP39A1Q9NYL5 469 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
TPM4-209ENST00000588483 CDC45O75419 566 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 PARP1P09874 1014 aaKnown RBP12.27□□□□□ -0.45
TPM4-209ENST00000588483 AKR1A1P14550 325 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 CNGA1P29973 690 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 ANTXR2P58335 489 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 SNAP25P60880 206 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 SART3Q15020 963 aaKnown RBP12.27□□□□□ -0.45
TPM4-209ENST00000588483 PRAMEF19Q5SWL8 479 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 RGS22Q8NE09 1264 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 MORC4Q8TE76 937 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 MTMR8Q96EF0 704 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 KATNBL1Q9H079 304 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 ASTN1O14525 1302 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 MYH6P13533 1939 aa12.27□□□□□ -0.45
TPM4-209ENST00000588483 PALM3A6NDB9 673 aaPredicted RBP12.26□□□□□ -0.45
TPM4-209ENST00000588483 SOWAHBA6NEL2 793 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 ASB14A6NK59 587 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 IFIT3O14879 490 aaKnown RBP12.26□□□□□ -0.45
TPM4-209ENST00000588483 SLC27A2O14975 620 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 GOLGA8HP0CJ92 632 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 TAL1P17542 331 aaPredicted RBP12.26□□□□□ -0.45
TPM4-209ENST00000588483 CNTN2Q02246 1040 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 TROAPQ12815 778 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 TSGA10IPQ3SY00 556 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 CASC1Q6TDU7 716 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 ARMCX2Q7L311 632 aa12.26□□□□□ -0.45
TPM4-209ENST00000588483 ADGRF4Q8IZF3 695 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms