RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 LINC00301Q8NCQ3 95 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 WRNIP1Q96S55 665 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 CPVLQ9H3G5 476 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 MYH6P13533 1939 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 MYH4Q9Y623 1939 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 CCDC194A0A1B0GVG4 234 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 WDR46O15213 610 aaKnown RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 SPTLC2O15270 562 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 PPP6R2O75170 966 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 USP2O75604 605 aaPredicted RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 LETM1O95202 739 aaPredicted RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 INPP5BP32019 993 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 SLC16A2P36021 539 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 STAT2P52630 851 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 NR5A1Q13285 461 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 PRAMEF18Q5VWM3 479 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 KRT25Q7Z3Z0 450 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 OXER1Q8TDS5 423 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 GPKOWQ92917 476 aaPredicted RBP eCLIP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 RNF25Q96BH1 459 aaPredicted RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 AMNQ9BXJ7 453 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 PNMA2Q9UL42 364 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 MORC2Q9Y6X9 1032 aaPredicted RBP12.03□□□□□ -0.48
CHMP1B-202ENST00000588284 TRIM75PA6NK02 468 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 FDX1P10109 184 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 PTPRAP18433 802 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 ME1P48163 572 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 NPY5RQ15761 445 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 ADALQ6DHV7 355 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 RASGRP2Q7LDG7 609 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 ZNF280CQ8ND82 737 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 GPT2Q8TD30 523 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 TNFRSF25Q93038 417 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 CSADQ9Y600 493 aa12.02□□□□□ -0.49
CHMP1B-202ENST00000588284 A0A1W2PQ27 194 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 A0A1W2PQ64 194 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 A0A1W2PQD8 194 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 UNCXA6NJT0 531 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 ADCY7P51828 1080 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 BACE1P56817 501 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 SPP2Q13103 211 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 CDC37Q16543 378 aaPredicted RBP12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 EAPPQ56P03 285 aaPredicted RBP12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 FAM83BQ5T0W9 1011 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 SPICE1Q8N0Z3 855 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 CUL5Q93034 780 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 ZKSCAN4Q969J2 545 aaPredicted RBP12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 COA7Q96BR5 231 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 NUP88Q99567 741 aaPredicted RBP12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 RIC8AQ9NPQ8 531 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 PRR12Q9ULL5 1215 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 PCDHA6Q9UN73 950 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 PCDHA8Q9Y5H6 950 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 ZHX2Q9Y6X8 837 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 TCHHQ07283 1943 aa12.01□□□□□ -0.49
CHMP1B-202ENST00000588284 SCN4AP35499 1836 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 POTECB2RU33 542 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 ADM5C9JUS6 153 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 M0R2N6 131 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 CUTAO60888 179 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 ATP2B1P20020 1258 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 TOB1P50616 345 aaPredicted RBP12□□□□□ -0.49
CHMP1B-202ENST00000588284 NONOQ15233 471 aaKnown RBP eCLIP12□□□□□ -0.49
CHMP1B-202ENST00000588284 PTPAQ15257 358 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 ZYXQ15942 572 aaKnown RBP12□□□□□ -0.49
CHMP1B-202ENST00000588284 TYW1BQ6NUM6 668 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 PIK3AP1Q6ZUJ8 805 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 ARMC9Q7Z3E5 817 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 ANKRD13AQ8IZ07 590 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 CDCA5Q96FF9 252 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 PGBD1Q96JS3 809 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 C12orf42Q96LP6 360 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 TMOD4Q9NZQ9 345 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 PCDHA7Q9UN72 937 aa12□□□□□ -0.49
CHMP1B-202ENST00000588284 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 FOSP01100 380 aaPredicted RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 CMA1P23946 247 aa11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 ORC2Q13416 577 aaPredicted RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 MAP3K11Q16584 847 aa11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 KIAA1755Q5JYT7 1200 aa11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 TTC38Q5R3I4 469 aa11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 CAVIN1Q6NZI2 390 aaKnown RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 CCDC73Q6ZRK6 1079 aa11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 CCAR1Q8IX12 1150 aaKnown RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 REXO1Q8N1G1 1221 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms