RNA–Protein interactions for RNA: ENST00000588166.1

KDM4B-204, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-204ENST00000588166 KCTD2Q14681 263 aa17.36■□□□□ 0.37
KDM4B-204ENST00000588166 FAM83BQ5T0W9 1011 aa17.36■□□□□ 0.37
KDM4B-204ENST00000588166 CCSAPQ6IQ19 270 aaPredicted RBP17.36■□□□□ 0.37
KDM4B-204ENST00000588166 ANKRD33Q7Z3H0 272 aa17.36■□□□□ 0.37
KDM4B-204ENST00000588166 ZNF444Q8N0Y2 327 aaPredicted RBP17.36■□□□□ 0.37
KDM4B-204ENST00000588166 XIRP2A4UGR9 3374 aa17.36■□□□□ 0.37
KDM4B-204ENST00000588166 MCM3APO60318 1980 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 DNAJC25-GNG10A0A024R161 153 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 TMEM265A0A087WTH1 108 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 PQBP1O60828 265 aaKnown RBP17.35■□□□□ 0.37
KDM4B-204ENST00000588166 SNAI1O95863 264 aaPredicted RBP17.35■□□□□ 0.37
KDM4B-204ENST00000588166 COPB2P35606 906 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 KLHDC9Q8NEP7 349 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 RNPC3Q96LT9 517 aaKnown RBP17.35■□□□□ 0.37
KDM4B-204ENST00000588166 TOX2Q96NM4 488 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 TSEN34Q9BSV6 310 aaKnown RBP17.35■□□□□ 0.37
KDM4B-204ENST00000588166 DSCC1Q9BVC3 393 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 GOPCQ9HD26 462 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 ANAPC4Q9UJX5 808 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 RIPK3Q9Y572 518 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 SYNRGQ9UMZ2 1314 aa17.35■□□□□ 0.37
KDM4B-204ENST00000588166 ACLYP53396 1101 aa17.34■□□□□ 0.37
KDM4B-204ENST00000588166 MAMDC4Q6UXC1 1216 aa17.34■□□□□ 0.37
KDM4B-204ENST00000588166 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
KDM4B-204ENST00000588166 MSL3Q8N5Y2 521 aaKnown RBP17.34■□□□□ 0.37
KDM4B-204ENST00000588166 SYNGAP1Q96PV0 1343 aa17.34■□□□□ 0.37
KDM4B-204ENST00000588166 CTNNA3Q9UI47 895 aa17.34■□□□□ 0.37
KDM4B-204ENST00000588166 PRDM1O75626 825 aa17.33■□□□□ 0.36
KDM4B-204ENST00000588166 PCP11498 1178 aaKnown RBP17.33■□□□□ 0.36
KDM4B-204ENST00000588166 FOSL2P15408 326 aa17.33■□□□□ 0.36
KDM4B-204ENST00000588166 RAG1P15918 1043 aa17.33■□□□□ 0.36
KDM4B-204ENST00000588166 FPGSQ05932 587 aa17.33■□□□□ 0.36
KDM4B-204ENST00000588166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.36
KDM4B-204ENST00000588166 NUP88Q99567 741 aaPredicted RBP17.33■□□□□ 0.36
KDM4B-204ENST00000588166 SLF1Q9BQI6 1058 aa17.33■□□□□ 0.36
KDM4B-204ENST00000588166 TEX13BQ9BXU2 312 aa17.33■□□□□ 0.36
KDM4B-204ENST00000588166 TMEM39AQ9NV64 488 aa17.33■□□□□ 0.36
KDM4B-204ENST00000588166 TBX21Q9UL17 535 aa17.33■□□□□ 0.36
KDM4B-204ENST00000588166 PLIN4Q96Q06 1357 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 MYADML2A6NDP7 307 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 ATP2A1O14983 1001 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 ADCY6O43306 1168 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 TSPY3P0CV98 308 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 TSPY8P0CW00 308 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 CTDSPL2Q05D32 466 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 FGD4Q96M96 766 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 CNPY2Q9Y2B0 182 aa17.32■□□□□ 0.36
KDM4B-204ENST00000588166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
KDM4B-204ENST00000588166 IGKV6D-41A0A0C4DH26 115 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 MOXD2PA6NHM9 499 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 ZNF213O14771 459 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 SGSM2O43147 1006 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 ORC4O43929 436 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 NDUFB10O96000 172 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 CST5P28325 142 aaPredicted RBP17.31■□□□□ 0.36
KDM4B-204ENST00000588166 IRX5P78411 483 aaPredicted RBP17.31■□□□□ 0.36
KDM4B-204ENST00000588166 GRIN2CQ14957 1233 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 KCNA10Q16322 511 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 PPP4R3BQ5MIZ7 849 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 SNRNP48Q6IEG0 339 aaKnown RBP17.31■□□□□ 0.36
KDM4B-204ENST00000588166 CASC1Q6TDU7 716 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 ZNF467Q7Z7K2 595 aaPredicted RBP17.31■□□□□ 0.36
KDM4B-204ENST00000588166 RNF41Q9H4P4 317 aaPredicted RBP17.31■□□□□ 0.36
KDM4B-204ENST00000588166 STARD7Q9NQZ5 370 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 TRANK1O15050 2925 aa17.31■□□□□ 0.36
KDM4B-204ENST00000588166 MYO9BQ13459 2157 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 BDP1A6H8Y1 2624 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 F5H6K3 240 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 RAD21O60216 631 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 DUSP11O75319 330 aaKnown RBP17.3■□□□□ 0.36
KDM4B-204ENST00000588166 TIMP1P01033 207 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 DNAJB2P25686 324 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 CDK7P50613 346 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 HAND2P61296 217 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 TFAP4Q01664 338 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 KLRC3Q07444 240 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 IMMTQ16891 758 aaKnown RBP17.3■□□□□ 0.36
KDM4B-204ENST00000588166 MFSD6Q6ZSS7 791 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 C16orf59Q7L2K0 433 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 USP38Q8NB14 1042 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 NEDD1Q8NHV4 660 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 NUP133Q8WUM0 1156 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 IL25Q9H293 177 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 TOMM22Q9NS69 142 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 FAM184BQ9ULE4 1060 aa17.3■□□□□ 0.36
KDM4B-204ENST00000588166 NCOR1O75376 2440 aa17.29■□□□□ 0.36
KDM4B-204ENST00000588166 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.29■□□□□ 0.36
KDM4B-204ENST00000588166 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.29■□□□□ 0.36
KDM4B-204ENST00000588166 TSPY2A6NKD2 308 aa17.29■□□□□ 0.36
KDM4B-204ENST00000588166 DCDC2CA8MYV0 355 aa17.29■□□□□ 0.36
KDM4B-204ENST00000588166 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
KDM4B-204ENST00000588166 FGRP09769 529 aa17.29■□□□□ 0.36
KDM4B-204ENST00000588166 NT5C2P49902 561 aa17.29■□□□□ 0.36
KDM4B-204ENST00000588166 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
KDM4B-204ENST00000588166 RASIP1Q5U651 963 aa17.29■□□□□ 0.36
KDM4B-204ENST00000588166 PRPF38AQ8NAV1 312 aaKnown RBP17.29■□□□□ 0.36
KDM4B-204ENST00000588166 STAG1Q8WVM7 1258 aa17.29■□□□□ 0.36
KDM4B-204ENST00000588166 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.29■□□□□ 0.363e-7■■■■□ 26.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms