RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 PPP4R3BQ5MIZ7 849 aa18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 CCSAPQ6IQ19 270 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 RCSD1Q6JBY9 416 aa18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 FAM160B2Q86V87 743 aa18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 TICAM2Q86XR7 235 aa18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 BADQ92934 168 aa18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 CHMP4CQ96CF2 233 aa18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 AGBL1Q96MI9 1066 aa18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 TSEN34Q9BSV6 310 aaKnown RBP18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 STX8Q9UNK0 236 aa18.41■□□□□ 0.54
TRAPPC6A-204ENST00000588062 ADCY6O43306 1168 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 FGAP02671 866 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 CNTN2Q02246 1040 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 ACVR2BQ13705 512 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 RASGRP2Q7LDG7 609 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 FAM133AQ8N9E0 248 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 ABHD16BQ9H3Z7 469 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 PRDM5Q9NQX1 630 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 HOMER2Q9NSB8 354 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 ZHX1Q9UKY1 873 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 SYNRGQ9UMZ2 1314 aa18.4■□□□□ 0.54
TRAPPC6A-204ENST00000588062 POTEB2H3BUK9 544 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 RANBP6O60518 1105 aaKnown RBP18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 DUSP11O75319 330 aaKnown RBP18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ITGB8P26012 769 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ACLYP53396 1101 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 IRX5P78411 483 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 SHHQ15465 462 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 MCMDC2Q4G0Z9 681 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 KCTD1Q719H9 257 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ARMCX2Q7L311 632 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 SMC5Q8IY18 1101 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 LNPKQ9C0E8 428 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 KATNBL1Q9H079 304 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ACAD9Q9H845 621 aa18.39■□□□□ 0.53
TRAPPC6A-204ENST00000588062 MYADML2A6NDP7 307 aa18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 AAMPQ13685 434 aa18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 KCNA10Q16322 511 aa18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CCDC144BQ3MJ40 725 aa18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 C9orf50Q5SZB4 431 aa18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 A1CFQ9NQ94 594 aaKnown RBP18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 RNF146Q9NTX7 359 aa18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 PRR12Q9ULL5 1215 aa18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ISY1Q9ULR0 285 aaKnown RBP18.38■□□□□ 0.53
TRAPPC6A-204ENST00000588062 SOWAHBA6NEL2 793 aa18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CLTBP09497 229 aa18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CST5P28325 142 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 SNAP25P60880 206 aa18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 NMIQ13287 307 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 TKFCQ3LXA3 575 aa18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 FAM109BQ6ICB4 259 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ANKRD33Q7Z3H0 272 aa18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 TOX2Q96NM4 488 aa18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 UPF3AQ9H1J1 476 aaKnown RBP18.37■□□□□ 0.53
TRAPPC6A-204ENST00000588062 MOXD2PA6NHM9 499 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ASTN1O14525 1302 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 KIAA0355O15063 1070 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 PQBP1O60828 265 aaKnown RBP18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ZMYM6O95789 1325 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ALAS1P13196 640 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 GJA9P57773 515 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 MUM1L1Q5H9M0 696 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 SLC17A8Q8NDX2 589 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 STARD7Q9NQZ5 370 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 TCP11L1Q9NUJ3 509 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 STXBP5LQ9Y2K9 1186 aa18.36■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CTAGE5O15320 804 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 IGHDP01880 384 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 NKX3-2P78367 333 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 FAAP100Q0VG06 881 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 TTBK2Q6IQ55 1244 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CCDC174Q6PII3 467 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 BTNL9Q6UXG8 535 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 NUP133Q8WUM0 1156 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 TMEM47Q9BQJ4 181 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 RWDD1Q9H446 243 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 MTMR7Q9Y216 660 aa18.35■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ELP1O95163 1332 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CCDC171Q6TFL3 1326 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 LCTP09848 1927 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 ASGR1P07306 291 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 C6orf222P0C671 652 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CDK7P50613 346 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 EPHB4P54760 987 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 RRP12Q5JTH9 1297 aaKnown RBP18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 B4GALNT3Q6L9W6 998 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 PLEKHM2Q8IWE5 1019 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 RANBP17Q9H2T7 1088 aaKnown RBP18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 OSBPL3Q9H4L5 887 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 TOMM22Q9NS69 142 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 CYP39A1Q9NYL5 469 aa18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
TRAPPC6A-204ENST00000588062 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms