RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 RAPGEFL1Q9UHV5 662 aa18.63■□□□□ 0.57
NCLN-203ENST00000587740 FAM184BQ9ULE4 1060 aa18.63■□□□□ 0.57
NCLN-203ENST00000587740 SLC4A4Q9Y6R1 1079 aa18.63■□□□□ 0.57
NCLN-203ENST00000587740 SYNGAP1Q96PV0 1343 aa18.63■□□□□ 0.57
NCLN-203ENST00000587740 M0R2C6 588 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 HIP1O00291 1037 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 GPAA1O43292 621 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 DUSP11O75319 330 aaKnown RBP18.62■□□□□ 0.57
NCLN-203ENST00000587740 CSF2RAP15509 400 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 SDSP20132 328 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 COPB2P35606 906 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 MSL3Q8N5Y2 521 aaKnown RBP18.62■□□□□ 0.57
NCLN-203ENST00000587740 PPM1EQ8WY54 764 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 DDRGK1Q96HY6 314 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
NCLN-203ENST00000587740 SEC62Q99442 399 aaKnown RBP18.62■□□□□ 0.57
NCLN-203ENST00000587740 NUP88Q99567 741 aaPredicted RBP18.62■□□□□ 0.57
NCLN-203ENST00000587740 GOPCQ9HD26 462 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 HELLSQ9NRZ9 838 aa18.62■□□□□ 0.57
NCLN-203ENST00000587740 ZHX1Q9UKY1 873 aaPredicted RBP18.62■□□□□ 0.57
NCLN-203ENST00000587740 GREB1LQ9C091 1923 aaPredicted RBP18.61■□□□□ 0.57
NCLN-203ENST00000587740 ELP1O95163 1332 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 RAD21O60216 631 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 ACRP10323 421 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 GNAT2P19087 354 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 CST5P28325 142 aaPredicted RBP18.61■□□□□ 0.57
NCLN-203ENST00000587740 ADGRE1Q14246 886 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 CTR9Q6PD62 1173 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 SKAP1Q86WV1 359 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 FGD4Q96M96 766 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 PRDM12Q9H4Q4 367 aa18.61■□□□□ 0.57
NCLN-203ENST00000587740 REV3LO60673 3130 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 BDP1A6H8Y1 2624 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 ASGR1P07306 291 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 NMIQ13287 307 aaPredicted RBP18.6■□□□□ 0.57
NCLN-203ENST00000587740 PPIGQ13427 754 aaKnown RBP eCLIP18.6■□□□□ 0.573e-12■■□□□ 11.5
NCLN-203ENST00000587740 ACVR2BQ13705 512 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 SNRNP48Q6IEG0 339 aaKnown RBP18.6■□□□□ 0.57
NCLN-203ENST00000587740 ZNF365Q70YC5 407 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 DDX11Q96FC9 970 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 GLT1D1Q96MS3 346 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 SLF1Q9BQI6 1058 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 DIAPH3Q9NSV4 1193 aa18.6■□□□□ 0.57
NCLN-203ENST00000587740 ARVCFO00192 962 aa18.59■□□□□ 0.57
NCLN-203ENST00000587740 CTAGE5O15320 804 aa18.59■□□□□ 0.57
NCLN-203ENST00000587740 C6orf222P0C671 652 aaPredicted RBP18.59■□□□□ 0.57
NCLN-203ENST00000587740 MCMDC2Q4G0Z9 681 aa18.59■□□□□ 0.57
NCLN-203ENST00000587740 AKNAD1Q5T1N1 836 aa18.59■□□□□ 0.57
NCLN-203ENST00000587740 CCDC129Q6ZRS4 1044 aa18.59■□□□□ 0.57
NCLN-203ENST00000587740 FAM126BQ8IXS8 530 aa18.59■□□□□ 0.57
NCLN-203ENST00000587740 AMOTL1Q8IY63 956 aa18.59■□□□□ 0.57
NCLN-203ENST00000587740 FAM227BQ96M60 508 aa18.59■□□□□ 0.57
NCLN-203ENST00000587740 GAS2L1Q99501 681 aaPredicted RBP18.59■□□□□ 0.57
NCLN-203ENST00000587740 UPF3AQ9H1J1 476 aaKnown RBP18.59■□□□□ 0.57
NCLN-203ENST00000587740 MROH7Q68CQ1 1323 aa18.58■□□□□ 0.57
NCLN-203ENST00000587740 A0A0D9SFI3 127 aa18.58■□□□□ 0.56
NCLN-203ENST00000587740 APPP05067 770 aa18.58■□□□□ 0.56
NCLN-203ENST00000587740 GJA9P57773 515 aa18.58■□□□□ 0.56
NCLN-203ENST00000587740 CCDC144BQ3MJ40 725 aa18.58■□□□□ 0.56
NCLN-203ENST00000587740 ZNF467Q7Z7K2 595 aaPredicted RBP18.58■□□□□ 0.56
NCLN-203ENST00000587740 ATXN2LQ8WWM7 1075 aaKnown RBP18.58■□□□□ 0.56
NCLN-203ENST00000587740 ASB2Q96Q27 587 aa18.58■□□□□ 0.56
NCLN-203ENST00000587740 PPP1R12CQ9BZL4 782 aa18.58■□□□□ 0.56
NCLN-203ENST00000587740 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.58■□□□□ 0.56
NCLN-203ENST00000587740 CXXC1Q9P0U4 656 aaPredicted RBP18.58■□□□□ 0.56
NCLN-203ENST00000587740 A0A0U1RQG5 324 aaPredicted RBP18.57■□□□□ 0.56
NCLN-203ENST00000587740 PATL2C9JE40 543 aaKnown RBP18.57■□□□□ 0.56
NCLN-203ENST00000587740 F5H6K3 240 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 ATP2A1O14983 1001 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 NDUFB10O96000 172 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 MFAP1P55081 439 aaKnown RBP18.57■□□□□ 0.56
NCLN-203ENST00000587740 KLRC3Q07444 240 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 GNASQ5JWF2 1037 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 CWC27Q6UX04 472 aaKnown RBP18.57■□□□□ 0.56
NCLN-203ENST00000587740 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.57■□□□□ 0.56
NCLN-203ENST00000587740 CPXCR1Q8N123 301 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 TMEM199Q8N511 208 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 PCSK9Q8NBP7 692 aaKnown RBP18.57■□□□□ 0.56
NCLN-203ENST00000587740 VTI1AQ96AJ9 217 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 KATNBL1Q9H079 304 aa18.57■□□□□ 0.56
NCLN-203ENST00000587740 GBF1Q92538 1859 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 GSG1L2A8MUP6 293 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 CD4P01730 458 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 RASA1P20936 1047 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 CYP2C18P33260 490 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 CCDC85BQ15834 202 aaPredicted RBP18.56■□□□□ 0.56
NCLN-203ENST00000587740 PRPF38AQ8NAV1 312 aaKnown RBP18.56■□□□□ 0.56
NCLN-203ENST00000587740 NACAP1Q9BZK3 213 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 ABHD16BQ9H3Z7 469 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 RAVER2Q9HCJ3 691 aaKnown RBP18.56■□□□□ 0.56
NCLN-203ENST00000587740 NYAP2Q9P242 653 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 THEGQ9P2T0 379 aa18.56■□□□□ 0.56
NCLN-203ENST00000587740 ASTN1O14525 1302 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 UMODL1Q5DID0 1318 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 TDO2P48775 406 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 NKX3-2P78367 333 aa18.55■□□□□ 0.56
NCLN-203ENST00000587740 BMP2KLQ5H9B9 411 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms