RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 NEDD1Q8NHV4 660 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 MYLIPQ8WY64 445 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 NACAP1Q9BZK3 213 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 SPC25Q9HBM1 224 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 TTC28Q96AY4 2481 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-213ENST00000587604 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-213ENST00000587604 MYADML2A6NDP7 307 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 ASGR1P07306 291 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 C6orf222P0C671 652 aaPredicted RBP16.74■□□□□ 0.27
DNMT1-213ENST00000587604 BMP3P12645 472 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 CDK7P50613 346 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 PDE4BQ07343 736 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 CCDC144BQ3MJ40 725 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 LRRC47Q8N1G4 583 aaKnown RBP16.74■□□□□ 0.27
DNMT1-213ENST00000587604 FGD4Q96M96 766 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 UPF3AQ9H1J1 476 aaKnown RBP16.74■□□□□ 0.27
DNMT1-213ENST00000587604 TBX21Q9UL17 535 aa16.74■□□□□ 0.27
DNMT1-213ENST00000587604 SLC3A2P08195 630 aaKnown RBP16.73■□□□□ 0.27
DNMT1-213ENST00000587604 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
DNMT1-213ENST00000587604 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
DNMT1-213ENST00000587604 FOSL2P15408 326 aa16.73■□□□□ 0.27
DNMT1-213ENST00000587604 GJA9P57773 515 aa16.73■□□□□ 0.27
DNMT1-213ENST00000587604 ARMCX2Q7L311 632 aa16.73■□□□□ 0.27
DNMT1-213ENST00000587604 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
DNMT1-213ENST00000587604 TTC41PQ6P2S7 1318 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 ADCY6O43306 1168 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 IRX5P78411 483 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-213ENST00000587604 TFAP4Q01664 338 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 GNASQ5JWF2 1037 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 VTI1AQ96AJ9 217 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
DNMT1-213ENST00000587604 A0A0U1RQG5 324 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-213ENST00000587604 TMEM232C9JQI7 657 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 ARVCFO00192 962 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 ERC2O15083 957 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 STAT2P52630 851 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 NKX3-2P78367 333 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 FAM160B2Q86V87 743 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 FAM133AQ8N9E0 248 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 SEC62Q99442 399 aaKnown RBP16.71■□□□□ 0.27
DNMT1-213ENST00000587604 NAPBQ9H115 298 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 ACAD9Q9H845 621 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 HOMER2Q9NSB8 354 aa16.71■□□□□ 0.27
DNMT1-213ENST00000587604 SPTBN5Q9NRC6 3674 aaKnown RBP16.7■□□□□ 0.26
DNMT1-213ENST00000587604 CTAGE5O15320 804 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 DNAJB2P25686 324 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 SLC1A4P43007 532 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 CNTN2Q02246 1040 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 PPARAQ07869 468 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 PPIGQ13427 754 aaKnown RBP eCLIP16.7■□□□□ 0.261e-14■■■□□ 17.8
DNMT1-213ENST00000587604 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 CCDC174Q6PII3 467 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 C16orf59Q7L2K0 433 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 GMCL1Q96IK5 515 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.7■□□□□ 0.267e-11■■■□□ 18.7
DNMT1-213ENST00000587604 ZNF536O15090 1300 aa16.7■□□□□ 0.26
DNMT1-213ENST00000587604 ASB14A6NK59 587 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 PLA2G6O60733 806 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 TNFAIP2Q03169 654 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 GRIN2CQ14957 1233 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 TKFCQ3LXA3 575 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 TMEM240Q5SV17 173 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 ZMYM1Q5SVZ6 1142 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 FAM126BQ8IXS8 530 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 TMEM199Q8N511 208 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 PI4K2BQ8TCG2 481 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 AGBL1Q96MI9 1066 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 FSD1Q9BTV5 496 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 ZNF576Q9H609 170 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 A1CFQ9NQ94 594 aaKnown RBP16.69■□□□□ 0.26
DNMT1-213ENST00000587604 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
DNMT1-213ENST00000587604 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
DNMT1-213ENST00000587604 SOWAHBA6NEL2 793 aa16.68■□□□□ 0.26
DNMT1-213ENST00000587604 TLR3O15455 904 aaKnown RBP16.68■□□□□ 0.26
DNMT1-213ENST00000587604 CSF2RAP15509 400 aa16.68■□□□□ 0.26
DNMT1-213ENST00000587604 MCCP23508 829 aa16.68■□□□□ 0.26
DNMT1-213ENST00000587604 IKQ13123 557 aaPredicted RBP16.68■□□□□ 0.26
DNMT1-213ENST00000587604 TIFAQ96CG3 184 aa16.68■□□□□ 0.26
DNMT1-213ENST00000587604 GNEQ9Y223 722 aaKnown RBP16.68■□□□□ 0.26
DNMT1-213ENST00000587604 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.67■□□□□ 0.26
DNMT1-213ENST00000587604 CABYRO75952 493 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 CD4P01730 458 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 BEX3Q00994 111 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 RASIP1Q5U651 963 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 RCSD1Q6JBY9 416 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 CCDC129Q6ZRS4 1044 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
DNMT1-213ENST00000587604 TRERF1Q96PN7 1200 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 STX8Q9UNK0 236 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.67■□□□□ 0.26
DNMT1-213ENST00000587604 ASTN1O14525 1302 aa16.67■□□□□ 0.26
DNMT1-213ENST00000587604 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
DNMT1-213ENST00000587604 ALAS1P13196 640 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms