RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 ARMCX2Q7L311 632 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 LRRC47Q8N1G4 583 aaKnown RBP19.5■□□□□ 0.71
NPC1-205ENST00000587163 PCSK9Q8NBP7 692 aaKnown RBP19.5■□□□□ 0.71
NPC1-205ENST00000587163 VTI1AQ96AJ9 217 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 KATNBL1Q9H079 304 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 CHMP4BQ9H444 224 aaKnown RBP19.5■□□□□ 0.71
NPC1-205ENST00000587163 ZNF576Q9H609 170 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 FEM1BQ9UK73 627 aa19.5■□□□□ 0.71
NPC1-205ENST00000587163 CTDP1Q9Y5B0 961 aaPredicted RBP19.5■□□□□ 0.71
NPC1-205ENST00000587163 GRXCR1A8MXD5 290 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 M0R2C6 588 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 ARVCFO00192 962 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 GPAA1O43292 621 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 CSF2RAP15509 400 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 PBX2P40425 430 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 CCDC144CPQ8IYA2 1237 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 ZNF444Q8N0Y2 327 aaPredicted RBP19.49■□□□□ 0.71
NPC1-205ENST00000587163 CHST13Q8NET6 341 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 TIFAQ96CG3 184 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 MROH7Q68CQ1 1323 aa19.49■□□□□ 0.71
NPC1-205ENST00000587163 APPP05067 770 aa19.48■□□□□ 0.71
NPC1-205ENST00000587163 ACRP10323 421 aa19.48■□□□□ 0.71
NPC1-205ENST00000587163 TDO2P48775 406 aa19.48■□□□□ 0.71
NPC1-205ENST00000587163 RASIP1Q5U651 963 aa19.48■□□□□ 0.71
NPC1-205ENST00000587163 FAM126BQ8IXS8 530 aa19.48■□□□□ 0.71
NPC1-205ENST00000587163 GMCL1P1Q8NEA9 526 aa19.48■□□□□ 0.71
NPC1-205ENST00000587163 HOMER2Q9NSB8 354 aa19.48■□□□□ 0.71
NPC1-205ENST00000587163 FBXO40Q9UH90 709 aa19.48■□□□□ 0.71
NPC1-205ENST00000587163 A0A0U1RQG5 324 aaPredicted RBP19.47■□□□□ 0.71
NPC1-205ENST00000587163 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.47■□□□□ 0.71
NPC1-205ENST00000587163 PATL2C9JE40 543 aaKnown RBP19.47■□□□□ 0.71
NPC1-205ENST00000587163 TTLL1O95922 423 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 BMP3P12645 472 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 OAZ1P54368 228 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 BEX3Q00994 111 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 PPIGQ13427 754 aaKnown RBP eCLIP19.47■□□□□ 0.71
NPC1-205ENST00000587163 SLFN13Q68D06 897 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 ZNF365Q70YC5 407 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 IFNL3Q8IZI9 196 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 CHMP4CQ96CF2 233 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 PBX4Q9BYU1 374 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 PPP1R12CQ9BZL4 782 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 SPC25Q9HBM1 224 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 PRDM6Q9NQX0 595 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 ASTN1O14525 1302 aa19.47■□□□□ 0.71
NPC1-205ENST00000587163 CD4P01730 458 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 GNAT2P19087 354 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 PTGS1P23219 599 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 CYP2C18P33260 490 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 FAM133AQ8N9E0 248 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 NEDD1Q8NHV4 660 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 AGBL1Q96MI9 1066 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 SEC62Q99442 399 aaKnown RBP19.46■□□□□ 0.71
NPC1-205ENST00000587163 RCAN3Q9UKA8 241 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 SYNPO2Q9UMS6 1093 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 DDX49Q9Y6V7 483 aaKnown RBP19.46■□□□□ 0.71
NPC1-205ENST00000587163 ZNF536O15090 1300 aa19.46■□□□□ 0.71
NPC1-205ENST00000587163 TTC28Q96AY4 2481 aa19.45■□□□□ 0.7
NPC1-205ENST00000587163 SOWAHBA6NEL2 793 aa19.45■□□□□ 0.7
NPC1-205ENST00000587163 TMEM232C9JQI7 657 aa19.45■□□□□ 0.7
NPC1-205ENST00000587163 ZFYP08048 801 aaPredicted RBP19.45■□□□□ 0.7
NPC1-205ENST00000587163 NKX3-2P78367 333 aa19.45■□□□□ 0.7
NPC1-205ENST00000587163 TMEM199Q8N511 208 aa19.45■□□□□ 0.7
NPC1-205ENST00000587163 SYMPKQ92797 1274 aaKnown RBP19.45■□□□□ 0.7
NPC1-205ENST00000587163 DCTPP1Q9H773 170 aa19.45■□□□□ 0.7
NPC1-205ENST00000587163 ZNF287Q9HBT7 754 aa19.45■□□□□ 0.7
NPC1-205ENST00000587163 TSPY3P0CV98 308 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 TSPY8P0CW00 308 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 TFAP4Q01664 338 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 TNFAIP2Q03169 654 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 CXCL17Q6UXB2 119 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 CCDC129Q6ZRS4 1044 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 ACAD9Q9H845 621 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 A1CFQ9NQ94 594 aaKnown RBP19.44■□□□□ 0.7
NPC1-205ENST00000587163 GNEQ9Y223 722 aaKnown RBP19.44■□□□□ 0.7
NPC1-205ENST00000587163 CHD9Q3L8U1 2897 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 PLIN4Q96Q06 1357 aa19.44■□□□□ 0.7
NPC1-205ENST00000587163 TLR3O15455 904 aaKnown RBP19.43■□□□□ 0.7
NPC1-205ENST00000587163 SNAP25P60880 206 aa19.43■□□□□ 0.7
NPC1-205ENST00000587163 DIEXFQ68CQ4 756 aaKnown RBP19.43■□□□□ 0.7
NPC1-205ENST00000587163 NOL8Q76FK4 1167 aaKnown RBP19.43■□□□□ 0.7
NPC1-205ENST00000587163 SLC43A3Q8NBI5 491 aa19.43■□□□□ 0.7
NPC1-205ENST00000587163 STAG1Q8WVM7 1258 aa19.43■□□□□ 0.7
NPC1-205ENST00000587163 PPM1EQ8WY54 764 aa19.43■□□□□ 0.7
NPC1-205ENST00000587163 GPATCH3Q96I76 525 aa19.43■□□□□ 0.7
NPC1-205ENST00000587163 PRDM12Q9H4Q4 367 aa19.43■□□□□ 0.7
NPC1-205ENST00000587163 RNF146Q9NTX7 359 aa19.43■□□□□ 0.7
NPC1-205ENST00000587163 CXXC1Q9P0U4 656 aaPredicted RBP19.43■□□□□ 0.7
NPC1-205ENST00000587163 ISY1Q9ULR0 285 aaKnown RBP19.43■□□□□ 0.7
NPC1-205ENST00000587163 UMODL1Q5DID0 1318 aa19.43■□□□□ 0.7
NPC1-205ENST00000587163 FDX1P10109 184 aa19.42■□□□□ 0.7
NPC1-205ENST00000587163 MCCP23508 829 aa19.42■□□□□ 0.7
NPC1-205ENST00000587163 STAT2P52630 851 aa19.42■□□□□ 0.7
NPC1-205ENST00000587163 TJAP1Q5JTD0 557 aa19.42■□□□□ 0.7
NPC1-205ENST00000587163 TMEM63BQ5T3F8 832 aa19.42■□□□□ 0.7
NPC1-205ENST00000587163 PSRC1Q6PGN9 363 aaPredicted RBP19.42■□□□□ 0.7
NPC1-205ENST00000587163 CCDC174Q6PII3 467 aa19.42■□□□□ 0.7
NPC1-205ENST00000587163 CHURC1Q8WUH1 139 aa19.42■□□□□ 0.7
NPC1-205ENST00000587163 TRERF1Q96PN7 1200 aa19.42■□□□□ 0.7
NPC1-205ENST00000587163 IL23AQ9NPF7 189 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms