RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 KCTD1Q719H9 257 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 HEATR3Q7Z4Q2 680 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 SIAH1Q8IUQ4 282 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 PIGSQ96S52 555 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 FOXP1Q9H334 677 aaPredicted RBP11.7□□□□□ -0.54
APOC1-201ENST00000586638 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 PTPN22Q9Y2R2 807 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 OTOFQ9HC10 1997 aa11.7□□□□□ -0.54
APOC1-201ENST00000586638 TBC1D12O60347 775 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 YEATS4O95619 227 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 LIG1P18858 919 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
APOC1-201ENST00000586638 NASPP49321 788 aaPredicted RBP11.69□□□□□ -0.54
APOC1-201ENST00000586638 NLRP5P59047 1200 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
APOC1-201ENST00000586638 HABP4Q5JVS0 413 aaKnown RBP11.69□□□□□ -0.54
APOC1-201ENST00000586638 ANO1Q5XXA6 986 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 SLFN13Q68D06 897 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 CCDC84Q86UT8 332 aaPredicted RBP11.69□□□□□ -0.54
APOC1-201ENST00000586638 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 DCAF4Q8WV16 495 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 RRP36Q96EU6 259 aaKnown RBP11.69□□□□□ -0.54
APOC1-201ENST00000586638 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 EFCC1Q9HA90 598 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 VAT1LQ9HCJ6 419 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 POLR3EQ9NVU0 708 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 RCOR1Q9UKL0 485 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 SSC5DA1L4H1 1573 aa11.69□□□□□ -0.54
APOC1-201ENST00000586638 PHIPQ8WWQ0 1821 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 A0A1W2PRG0 241 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 GOLGA6L4A6NEF3 574 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 NDUFB10O96000 172 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 SLC16A2P36021 539 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 SP3Q02447 781 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 CRHR2Q13324 411 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 SF3A1Q15459 793 aaKnown RBP11.68□□□□□ -0.54
APOC1-201ENST00000586638 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 LINC00301Q8NCQ3 95 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 RASGRP4Q8TDF6 673 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 ACER1Q8TDN7 264 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 TNFRSF25Q93038 417 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 MKL1Q969V6 931 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 SYAP1Q96A49 352 aaPredicted RBP11.68□□□□□ -0.54
APOC1-201ENST00000586638 NUP88Q99567 741 aaPredicted RBP11.68□□□□□ -0.54
APOC1-201ENST00000586638 GOLPH3LQ9H4A5 285 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 RIOX1Q9H6W3 641 aa11.68□□□□□ -0.54
APOC1-201ENST00000586638 SEC63Q9UGP8 760 aaKnown RBP11.68□□□□□ -0.54
APOC1-201ENST00000586638 A0A0C4DFX4 3053 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
APOC1-201ENST00000586638 WNT7AO00755 349 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 SPTLC2O15270 562 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 EN2P19622 333 aaPredicted RBP11.67□□□□□ -0.54
APOC1-201ENST00000586638 ATP2B1P20020 1258 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 GJA5P36382 358 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 SLC1A4P43007 532 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 ME1P48163 572 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 TOB1P50616 345 aaPredicted RBP11.67□□□□□ -0.54
APOC1-201ENST00000586638 NAPAP54920 295 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 ARHGEF6Q15052 776 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 PTPAQ15257 358 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 GPATCH4Q5T3I0 446 aaKnown RBP11.67□□□□□ -0.54
APOC1-201ENST00000586638 CCDC183Q5T5S1 534 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 BLIDQ8IZY5 108 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 GMCL1P1Q8NEA9 526 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 PTPN18Q99952 460 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 TMEM106CQ9BVX2 250 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 ARHGEF10LQ9HCE6 1279 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 SH3GLB2Q9NR46 395 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 BARHL2Q9NY43 387 aa11.67□□□□□ -0.54
APOC1-201ENST00000586638 SYCE3A1L190 88 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 USP17L10C9JJH3 530 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 CALML3P27482 149 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 SMARCA1P28370 1054 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 MARCKSP29966 332 aaPredicted RBP11.66□□□□□ -0.54
APOC1-201ENST00000586638 DEKP35659 375 aaKnown RBP11.66□□□□□ -0.54
APOC1-201ENST00000586638 CAP2P40123 477 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 ZYXQ15942 572 aaKnown RBP11.66□□□□□ -0.54
APOC1-201ENST00000586638 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 ADGRF4Q8IZF3 695 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 FSIP1Q8NA03 581 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 DAGLBQ8NCG7 672 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 KCNG4Q8TDN1 519 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 ARMC5Q96C12 935 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 GMCL1Q96IK5 515 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 ELP3Q9H9T3 547 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 JMJD4Q9H9V9 463 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 PCDHA7Q9UN72 937 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 PCDHA4Q9UN74 947 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
APOC1-201ENST00000586638 PARP14Q460N5 1801 aa11.65□□□□□ -0.54
APOC1-201ENST00000586638 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
APOC1-201ENST00000586638 F5H6K3 240 aa11.65□□□□□ -0.54
APOC1-201ENST00000586638 PPP1R11O60927 126 aaPredicted RBP11.65□□□□□ -0.54
APOC1-201ENST00000586638 ZNF445P59923 1031 aa11.65□□□□□ -0.54
APOC1-201ENST00000586638 MAP3K10Q02779 954 aa11.65□□□□□ -0.54
APOC1-201ENST00000586638 KLRC3Q07444 240 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms