RNA–Protein interactions for RNA: ENST00000585760.5

GCDH-204, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-204ENST00000585760 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
GCDH-204ENST00000585760 ZNF236Q9UL36 1845 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 KDM4AO75164 1064 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 LHX8Q68G74 356 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 DGKHQ86XP1 1220 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 MAML3Q96JK9 1138 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 ZKSCAN3Q9BRR0 538 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 KRT23Q9C075 422 aa17.03■□□□□ 0.32
GCDH-204ENST00000585760 DIS3Q9Y2L1 958 aaKnown RBP17.03■□□□□ 0.32
GCDH-204ENST00000585760 B4E1Z4 1266 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 PGK2P07205 417 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 PTH1RQ03431 593 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 ZNF792Q3KQV3 632 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
GCDH-204ENST00000585760 RASGRP2Q7LDG7 609 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 CHST13Q8NET6 341 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 LBHD1Q9BQE6 289 aaPredicted RBP17.02■□□□□ 0.32
GCDH-204ENST00000585760 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 ZSWIM5Q9P217 1185 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 FBXO40Q9UH90 709 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 PRR12Q9ULL5 1215 aa17.02■□□□□ 0.32
GCDH-204ENST00000585760 CYBAP13498 195 aa17.01■□□□□ 0.31
GCDH-204ENST00000585760 CNGA1P29973 690 aa17.01■□□□□ 0.31
GCDH-204ENST00000585760 BTNL9Q6UXG8 535 aa17.01■□□□□ 0.31
GCDH-204ENST00000585760 TRPV1Q8NER1 839 aa17.01■□□□□ 0.31
GCDH-204ENST00000585760 ANKS1AQ92625 1134 aa17.01■□□□□ 0.31
GCDH-204ENST00000585760 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
GCDH-204ENST00000585760 FAM161BQ96MY7 647 aa17.01■□□□□ 0.31
GCDH-204ENST00000585760 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
GCDH-204ENST00000585760 ZNF536O15090 1300 aa17■□□□□ 0.31
GCDH-204ENST00000585760 MSCO60682 206 aa17■□□□□ 0.31
GCDH-204ENST00000585760 PDHBP11177 359 aa17■□□□□ 0.31
GCDH-204ENST00000585760 TKFCQ3LXA3 575 aa17■□□□□ 0.31
GCDH-204ENST00000585760 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
GCDH-204ENST00000585760 CCDC136Q96JN2 1154 aa17■□□□□ 0.31
GCDH-204ENST00000585760 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
GCDH-204ENST00000585760 ZSCAN10Q96SZ4 725 aaPredicted RBP17■□□□□ 0.31
GCDH-204ENST00000585760 TINF2Q9BSI4 451 aa17■□□□□ 0.31
GCDH-204ENST00000585760 GPCPD1Q9NPB8 672 aa17■□□□□ 0.31
GCDH-204ENST00000585760 DDX20Q9UHI6 824 aaKnown RBP17■□□□□ 0.31
GCDH-204ENST00000585760 FRMPD2Q68DX3 1309 aaPredicted RBP16.99■□□□□ 0.31
GCDH-204ENST00000585760 DNAJC25-GNG10A0A024R161 153 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 CYP21A2P08686 494 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 SNHG28P0DPA3 235 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 SLC16A2P36021 539 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 TRDNQ13061 729 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 BMP2KLQ5H9B9 411 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 ZNF697Q5TEC3 545 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 SYDE2Q5VT97 1194 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 ANKRD35Q8N283 1001 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 MAP4K1Q92918 833 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 SENP6Q9GZR1 1112 aaPredicted RBP16.99■□□□□ 0.31
GCDH-204ENST00000585760 KAT14Q9H8E8 782 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 NRBP1Q9UHY1 535 aa16.99■□□□□ 0.31
GCDH-204ENST00000585760 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 SNAP25P60880 206 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 ZNF543Q08ER8 600 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 PRAMEF19Q5SWL8 479 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 CCDC174Q6PII3 467 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 SKAP1Q86WV1 359 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 MSL3Q8N5Y2 521 aaKnown RBP16.98■□□□□ 0.31
GCDH-204ENST00000585760 ENAHQ8N8S7 591 aaPredicted RBP16.98■□□□□ 0.31
GCDH-204ENST00000585760 PNMA1Q8ND90 353 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 TRERF1Q96PN7 1200 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 UBAC1Q9BSL1 405 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 RANBP17Q9H2T7 1088 aaKnown RBP16.98■□□□□ 0.31
GCDH-204ENST00000585760 ACAD9Q9H845 621 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 HOMER2Q9NSB8 354 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 PRKAG2Q9UGJ0 569 aa16.98■□□□□ 0.31
GCDH-204ENST00000585760 ZNFX1Q9P2E3 1918 aaKnown RBP16.98■□□□□ 0.31
GCDH-204ENST00000585760 TNKSO95271 1327 aa16.97■□□□□ 0.31
GCDH-204ENST00000585760 SEPT4O43236 478 aa16.97■□□□□ 0.31
GCDH-204ENST00000585760 ICAM1P05362 532 aa16.97■□□□□ 0.31
GCDH-204ENST00000585760 ALAS1P13196 640 aa16.97■□□□□ 0.31
GCDH-204ENST00000585760 GPATCH4Q5T3I0 446 aaKnown RBP16.97■□□□□ 0.31
GCDH-204ENST00000585760 RNF146Q9NTX7 359 aa16.97■□□□□ 0.31
GCDH-204ENST00000585760 NEFLP07196 543 aa16.96■□□□□ 0.31
GCDH-204ENST00000585760 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.31
GCDH-204ENST00000585760 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.31
GCDH-204ENST00000585760 ESYT1Q9BSJ8 1104 aa16.96■□□□□ 0.31
GCDH-204ENST00000585760 CCPG1Q9ULG6 757 aa16.96■□□□□ 0.31
GCDH-204ENST00000585760 E7EWF7 191 aa16.95■□□□□ 0.3
GCDH-204ENST00000585760 ATN1P54259 1190 aaPredicted RBP16.95■□□□□ 0.3
GCDH-204ENST00000585760 IFIT1BQ5T764 474 aaKnown RBP16.95■□□□□ 0.3
GCDH-204ENST00000585760 CYB5R4Q7L1T6 521 aa16.95■□□□□ 0.3
GCDH-204ENST00000585760 CDX2Q99626 313 aaPredicted RBP16.95■□□□□ 0.3
GCDH-204ENST00000585760 PNMA2Q9UL42 364 aa16.95■□□□□ 0.3
GCDH-204ENST00000585760 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
GCDH-204ENST00000585760 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
GCDH-204ENST00000585760 SYNGAP1Q96PV0 1343 aa16.95■□□□□ 0.3
GCDH-204ENST00000585760 DNM1LO00429 736 aa16.94■□□□□ 0.3
GCDH-204ENST00000585760 ZNF865P0CJ78 1059 aaPredicted RBP16.94■□□□□ 0.3
GCDH-204ENST00000585760 GOLGA8HP0CJ92 632 aa16.94■□□□□ 0.3
GCDH-204ENST00000585760 SEC23AQ15436 765 aa16.94■□□□□ 0.3
GCDH-204ENST00000585760 RALYLQ86SE5 291 aaKnown RBP16.94■□□□□ 0.3
GCDH-204ENST00000585760 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms