RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	CHURC1	Q8WUH1	139 aa		19.44	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	NUP133	Q8WUM0	1156 aa		19.44	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	GMCL1	Q96IK5	515 aa		19.44	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	AGBL1	Q96MI9	1066 aa		19.44	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	STARD7	Q9NQZ5	370 aa		19.44	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	19.44	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	PLIN4	Q96Q06	1357 aa		19.44	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	SLC1A4	P43007	532 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	CDK7	P50613	346 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	SMAD3	P84022	425 aa	Known RBP	19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	CTDSPL2	Q05D32	466 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ARMCX2	Q7L311	632 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	FAM160B2	Q86V87	743 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	KATNBL1	Q9H079	304 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	HOMER2	Q9NSB8	354 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ZNF536	O15090	1300 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	SALL3	Q9BXA9	1300 aa		19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	GREB1L	Q9C091	1923 aa	Predicted RBP	19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ZNFX1	Q9P2E3	1918 aa	Known RBP	19.43	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	PARP14	Q460N5	1801 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	DCDC2C	A8MYV0	355 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	NMT2	O60551	498 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	CST5	P28325	142 aa	Predicted RBP	19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	STAT2	P52630	851 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	GJA9	P57773	515 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ANKRD45	Q5TZF3	282 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	RCSD1	Q6JBY9	416 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	CCDC144CP	Q8IYA2	1237 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	FAM133A	Q8N9E0	248 aa		19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	CDX2	Q99626	313 aa	Predicted RBP	19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	UPF3A	Q9H1J1	476 aa	Known RBP	19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	LAMA2	P24043	3122 aa	Known RBP	19.42	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	SOWAHB	A6NEL2	793 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	CTAGE5	O15320	804 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	PLA2G6	O60733	806 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ASGR1	P07306	291 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	C6orf222	P0C671	652 aa	Predicted RBP	19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	SNAP25	P60880	206 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	GNAS	Q5JWF2	1037 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	VPS53	Q5VIR6	699 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	KCTD1	Q719H9	257 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	TTYH1	Q9H313	450 aa	Predicted RBP	19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ACAD9	Q9H845	621 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ISY1	Q9ULR0	285 aa	Known RBP	19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	STX8	Q9UNK0	236 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ELP1	O95163	1332 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	MYH8	P13535	1937 aa		19.41	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	COL11A1	P12107	1806 aa	Predicted RBP	19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	TSPY2	A6NKD2	308 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	NOV	P48745	357 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	FPGS	Q05932	587 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	PPP4R3B	Q5MIZ7	849 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	PCSK9	Q8NBP7	692 aa	Known RBP	19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	VTI1A	Q96AJ9	217 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	GLT1D1	Q96MS3	346 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	TRERF1	Q96PN7	1200 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	SPC25	Q9HBM1	224 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	A1CF	Q9NQ94	594 aa	Known RBP	19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	RNF146	Q9NTX7	359 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	ANAPC4	Q9UJX5	808 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	MYH7	P12883	1935 aa		19.4	■□□□□ 0.7
PRKAR1A-206	ENST00000585460	TIMP1	P01033	207 aa		19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	FGR	P09769	529 aa		19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	NKX3-2	P78367	333 aa		19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	IK	Q13123	557 aa	Predicted RBP	19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	ALX1	Q15699	326 aa		19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	TKFC	Q3LXA3	575 aa		19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	EVI5L	Q96CN4	794 aa		19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	RNPC3	Q96LT9	517 aa	Known RBP	19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	TBX21	Q9UL17	535 aa		19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	PRR12	Q9ULL5	1215 aa		19.39	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	ARVCF	O00192	962 aa		19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	RANBP6	O60518	1105 aa	Known RBP	19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	ALAS1	P13196	640 aa		19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	TNFAIP2	Q03169	654 aa		19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	CCDC174	Q6PII3	467 aa		19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	C16orf59	Q7L2K0	433 aa		19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	RASGRP2	Q7LDG7	609 aa		19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	HELLS	Q9NRZ9	838 aa		19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	DDX49	Q9Y6V7	483 aa	Known RBP	19.38	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	ASTN1	O14525	1302 aa		19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	ASB14	A6NK59	587 aa		19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	ORC4	O43929	436 aa		19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	PDE1A	P54750	535 aa		19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	RRP1	P56182	461 aa	Known RBP	19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	MUM1L1	Q5H9M0	696 aa		19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	CRBN	Q96SW2	442 aa		19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	GNE	Q9Y223	722 aa	Known RBP	19.37	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	FGA	P02671	866 aa		19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	BEX3	Q00994	111 aa		19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	TTBK2	Q6IQ55	1244 aa		19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	MFSD5	Q6N075	450 aa		19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	NOL8	Q76FK4	1167 aa	Known RBP	19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	FAM227B	Q96M60	508 aa		19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	PDGFC	Q9NRA1	345 aa		19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	CYP39A1	Q9NYL5	469 aa		19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	ZBTB47	Q9UFB7	747 aa	Predicted RBP	19.36	■□□□□ 0.69
PRKAR1A-206	ENST00000585460	MTMR7	Q9Y216	660 aa		19.36	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms