RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 TRPV6Q9H1D0 765 aa17.06■□□□□ 0.32
CSNK1D-224ENST00000584672 WNT8AQ9H1J5 351 aa17.06■□□□□ 0.32
CSNK1D-224ENST00000584672 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 CTAGE5O15320 804 aa17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 IPO8O15397 1037 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 ARMCX2Q7L311 632 aa17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 ALYREFQ86V81 257 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 FGD4Q96M96 766 aa17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 DNAJC2Q99543 621 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 SLF1Q9BQI6 1058 aa17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 NOC4LQ9BVI4 516 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 ABHD16BQ9H3Z7 469 aa17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 PCDHA11Q9Y5I1 949 aa17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 MTCH2Q9Y6C9 303 aa17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 MUC6Q6W4X9 2439 aa17.05■□□□□ 0.32
CSNK1D-224ENST00000584672 EPOPA6NHQ4 379 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 GOLIM4O00461 696 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 GTPBP6O43824 516 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 MBD4O95243 580 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 CA3P07451 260 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 ATP2A2P16615 1042 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 ANKRD35Q8N283 1001 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 CCDC17Q96LX7 622 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 RAVER2Q9HCJ3 691 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 C11orf16Q9NQ32 467 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 EXOC6BQ9Y2D4 811 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 NOP58Q9Y2X3 529 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 SCN5AQ14524 2016 aa17.04■□□□□ 0.32
CSNK1D-224ENST00000584672 ASTN1O14525 1302 aa17.03■□□□□ 0.32
CSNK1D-224ENST00000584672 TCRBV5S4A2TA0A5A2 114 aa17.03■□□□□ 0.32
CSNK1D-224ENST00000584672 ITGA7Q13683 1181 aa17.03■□□□□ 0.32
CSNK1D-224ENST00000584672 CCDC144CPQ8IYA2 1237 aa17.03■□□□□ 0.32
CSNK1D-224ENST00000584672 IL1RAPL2Q9NP60 686 aa17.03■□□□□ 0.32
CSNK1D-224ENST00000584672 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-224ENST00000584672 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-224ENST00000584672 DDX49Q9Y6V7 483 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-224ENST00000584672 GRIN2DO15399 1336 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 USP17L12C9JPN9 530 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 USP17L21D6R901 530 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 TLL1O43897 1013 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 B4GALT4O60513 344 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 PSMC6P62333 389 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 CNTN2Q02246 1040 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 TTLL4Q14679 1199 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 C12orf60Q5U649 245 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 DEFB128Q7Z7B8 93 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 ZNF467Q7Z7K2 595 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 STK11IPQ8N1F8 1099 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 SLC43A3Q8NBI5 491 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 ARNTL2Q8WYA1 636 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 VWCEQ96DN2 955 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 KANSL2Q9H9L4 492 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 HOMER2Q9NSB8 354 aa17.02■□□□□ 0.32
CSNK1D-224ENST00000584672 PIEZO1Q92508 2521 aa17.02■□□□□ 0.31
CSNK1D-224ENST00000584672 COL4A4P53420 1690 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-224ENST00000584672 ARHGEF15O94989 841 aa17.01■□□□□ 0.31
CSNK1D-224ENST00000584672 CHGBP05060 677 aa17.01■□□□□ 0.31
CSNK1D-224ENST00000584672 TNFAIP2Q03169 654 aa17.01■□□□□ 0.31
CSNK1D-224ENST00000584672 KIFC2Q96AC6 838 aa17.01■□□□□ 0.31
CSNK1D-224ENST00000584672 KATNBL1Q9H079 304 aa17.01■□□□□ 0.31
CSNK1D-224ENST00000584672 ZBED4O75132 1171 aa17■□□□□ 0.31
CSNK1D-224ENST00000584672 FSCN1Q16658 493 aaKnown RBP17■□□□□ 0.31
CSNK1D-224ENST00000584672 TLK2Q86UE8 772 aa17■□□□□ 0.31
CSNK1D-224ENST00000584672 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
CSNK1D-224ENST00000584672 RPUSD2Q8IZ73 545 aaKnown RBP17■□□□□ 0.31
CSNK1D-224ENST00000584672 HLA-CQ95604 372 aa17■□□□□ 0.31
CSNK1D-224ENST00000584672 GNL3Q9BVP2 549 aaKnown RBP eCLIP17■□□□□ 0.31
CSNK1D-224ENST00000584672 COG5Q9UP83 839 aa17■□□□□ 0.31
CSNK1D-224ENST00000584672 GREB1LQ9C091 1923 aaPredicted RBP17■□□□□ 0.31
CSNK1D-224ENST00000584672 GPR37L1O60883 481 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 NDUFB10O96000 172 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 CYP2C9P11712 490 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 TMEM63BQ5T3F8 832 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 SPRED2Q7Z698 418 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 AP5M1Q9H0R1 490 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 CD320Q9NPF0 282 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 ATP8A2Q9NTI2 1148 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 MYH4Q9Y623 1939 aa16.99■□□□□ 0.31
CSNK1D-224ENST00000584672 F5H6K3 240 aa16.98■□□□□ 0.31
CSNK1D-224ENST00000584672 DYNC1LI2O43237 492 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-224ENST00000584672 KLRC3Q07444 240 aa16.98■□□□□ 0.31
CSNK1D-224ENST00000584672 PRPF38AQ8NAV1 312 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-224ENST00000584672 AGBL1Q96MI9 1066 aa16.98■□□□□ 0.31
CSNK1D-224ENST00000584672 CABYRO75952 493 aa16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 TAP1Q03518 808 aa16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 EEPD1Q7L9B9 569 aa16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 PPP1R13LQ8WUF5 828 aa16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 CHMP4CQ96CF2 233 aa16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 PDGFCQ9NRA1 345 aa16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 TRMT13Q9NUP7 481 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 GNEQ9Y223 722 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 SLC4A4Q9Y6R1 1079 aa16.97■□□□□ 0.31
CSNK1D-224ENST00000584672 BRWD1Q9NSI6 2320 aa16.96■□□□□ 0.31
CSNK1D-224ENST00000584672 SOWAHBA6NEL2 793 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms