RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 NUDT12Q9BQG2 462 aa11.63□□□□□ -0.55
RFFL-212ENST00000584655 ZNF341Q9BYN7 854 aa11.63□□□□□ -0.55
RFFL-212ENST00000584655 DNAJC18Q9H819 358 aa11.63□□□□□ -0.55
RFFL-212ENST00000584655 TEX33O43247 280 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 SLC37A4O43826 429 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 NEMFO60524 1076 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 BMP6P22004 513 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 QRICH1Q2TAL8 776 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 RDH13Q8NBN7 331 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 SNX29Q8TEQ0 813 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 ZNF668Q96K58 619 aaPredicted RBP11.62□□□□□ -0.55
RFFL-212ENST00000584655 PHF20Q9BVI0 1012 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 ALDH8A1Q9H2A2 487 aaPredicted RBP11.62□□□□□ -0.55
RFFL-212ENST00000584655 LZTFL1Q9NQ48 299 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 CEP131Q9UPN4 1083 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 AHDC1Q5TGY3 1603 aaPredicted RBP11.62□□□□□ -0.55
RFFL-212ENST00000584655 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
RFFL-212ENST00000584655 FCER1AP12319 257 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
RFFL-212ENST00000584655 CALML3P27482 149 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 NONOQ15233 471 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFFL-212ENST00000584655 DACT2Q5SW24 774 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 MOB2Q70IA6 237 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 PODNQ7Z5L7 613 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 TRIM47Q96LD4 638 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 FUCA2Q9BTY2 467 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 PLEKHA4Q9H4M7 779 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 PCDHA6Q9UN73 950 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 PCDHA8Q9Y5H6 950 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 A0A1W2PRG0 241 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 N4BP3O15049 544 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 IL1R1P14778 569 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 SFPQP23246 707 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFFL-212ENST00000584655 INPP5BP32019 993 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 ADCY7P51828 1080 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 IL17AQ16552 155 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 FKBP15Q5T1M5 1219 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 PPP1R9BQ96SB3 815 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 ABCC6O95255 1503 aa11.62□□□□□ -0.55
RFFL-212ENST00000584655 TJP1Q07157 1748 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 ZBTB39O15060 712 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■□□□ 12.6
RFFL-212ENST00000584655 CDC37Q16543 378 aaPredicted RBP11.61□□□□□ -0.55
RFFL-212ENST00000584655 DALRD3Q5D0E6 543 aaKnown RBP11.61□□□□□ -0.55
RFFL-212ENST00000584655 GLIS3Q8NEA6 775 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 PIGOQ8TEQ8 1089 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 PPP1R13LQ8WUF5 828 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.559e-7■■■■□ 26.6
RFFL-212ENST00000584655 LRWD1Q9UFC0 647 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 ABCA3Q99758 1704 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 PLSCR1O15162 318 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 MYO1BO43795 1136 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 NDUFB10O96000 172 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 PLCG1P19174 1290 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 PABPC4Q13310 644 aaKnown RBP eCLIP11.61□□□□□ -0.558e-7■■□□□ 12
RFFL-212ENST00000584655 CCDC93Q567U6 631 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 NEDD1Q8NHV4 660 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 ELMO3Q96BJ8 720 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 DRC1Q96MC2 740 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 IKZF4Q9H2S9 585 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 FOXP1Q9H334 677 aaPredicted RBP11.61□□□□□ -0.55
RFFL-212ENST00000584655 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 PI4KBQ9UBF8 816 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 HOOK1Q9UJC3 728 aaKnown RBP11.61□□□□□ -0.55
RFFL-212ENST00000584655 PCDHA4Q9UN74 947 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 A0A0U1RQG5 324 aaPredicted RBP11.61□□□□□ -0.55
RFFL-212ENST00000584655 RRP9O43818 475 aaKnown RBP11.61□□□□□ -0.55
RFFL-212ENST00000584655 DDAH1O94760 285 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 TNNT1P13805 278 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 CD44P16070 742 aaKnown RBP11.61□□□□□ -0.55
RFFL-212ENST00000584655 PTPREP23469 700 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 CALCRLQ16602 461 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 C16orf86Q6ZW13 317 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 TCEAL9Q9UHQ7 104 aa11.61□□□□□ -0.55
RFFL-212ENST00000584655 ORC4O43929 436 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 PDE4DQ08499 809 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 FUT2Q10981 343 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 SPP2Q13103 211 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 CABP7Q86V35 215 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 DGKHQ86XP1 1220 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 KSR1Q8IVT5 923 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 PAGE5Q96GU1 130 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 CAMKK2Q96RR4 588 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 JMJD4Q9H9V9 463 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 HDAC9Q9UKV0 1011 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 PLEKHG2Q9H7P9 1386 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 CC2D2BQ6DHV5 1058 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 TAOK3Q9H2K8 898 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 HOXA10P31260 410 aaPredicted RBP11.6□□□□□ -0.55
RFFL-212ENST00000584655 NLRP12P59046 1061 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 MYL5Q02045 173 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 IQCB1Q15051 598 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 RESP18Q5W5W9 173 aa11.6□□□□□ -0.55
RFFL-212ENST00000584655 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.6□□□□□ -0.55
RFFL-212ENST00000584655 ZHX1Q9UKY1 873 aaPredicted RBP11.6□□□□□ -0.55
RFFL-212ENST00000584655 SPDYE3A6NKU9 549 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 E9PMD0 336 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms