RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 FARP2O94887 1054 aaPredicted RBP31.82■■■□□ 2.68
SMARCD2-210ENST00000584400 SLC16A2P36021 539 aa31.82■■■□□ 2.68
SMARCD2-210ENST00000584400 ZNF792Q3KQV3 632 aa31.82■■■□□ 2.68
SMARCD2-210ENST00000584400 TTBK2Q6IQ55 1244 aa31.82■■■□□ 2.68
SMARCD2-210ENST00000584400 CCDC174Q6PII3 467 aa31.82■■■□□ 2.68
SMARCD2-210ENST00000584400 COL11A1P12107 1806 aaPredicted RBP31.82■■■□□ 2.68
SMARCD2-210ENST00000584400 ZNF536O15090 1300 aa31.81■■■□□ 2.68
SMARCD2-210ENST00000584400 IGHA2P01877 340 aa31.81■■■□□ 2.68
SMARCD2-210ENST00000584400 PGK2P07205 417 aa31.81■■■□□ 2.68
SMARCD2-210ENST00000584400 CCND3P30281 292 aaPredicted RBP31.81■■■□□ 2.68
SMARCD2-210ENST00000584400 ASPRV1Q53RT3 343 aa31.81■■■□□ 2.68
SMARCD2-210ENST00000584400 KIAA0100Q14667 2235 aaKnown RBP31.81■■■□□ 2.68
SMARCD2-210ENST00000584400 ICAM1P05362 532 aa31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 RNF20Q5VTR2 975 aa31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 CYB5R4Q7L1T6 521 aa31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 MSL3Q8N5Y2 521 aaKnown RBP31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 AGBL1Q96MI9 1066 aa31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 HOMER2Q9NSB8 354 aa31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 RNF146Q9NTX7 359 aa31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 NRBP1Q9UHY1 535 aa31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 CCPG1Q9ULG6 757 aa31.8■■■□□ 2.68
SMARCD2-210ENST00000584400 ALAS1P13196 640 aa31.79■■■□□ 2.68
SMARCD2-210ENST00000584400 CNGA1P29973 690 aa31.79■■■□□ 2.68
SMARCD2-210ENST00000584400 TRERF1Q96PN7 1200 aa31.79■■■□□ 2.68
SMARCD2-210ENST00000584400 OGDHLQ9ULD0 1010 aa31.79■■■□□ 2.68
SMARCD2-210ENST00000584400 IFIT3O14879 490 aaKnown RBP31.78■■■□□ 2.68
SMARCD2-210ENST00000584400 PARP1P09874 1014 aaKnown RBP31.78■■■□□ 2.68
SMARCD2-210ENST00000584400 CYBAP13498 195 aa31.78■■■□□ 2.68
SMARCD2-210ENST00000584400 SEC23AQ15436 765 aa31.78■■■□□ 2.68
SMARCD2-210ENST00000584400 TINF2Q9BSI4 451 aa31.78■■■□□ 2.68
SMARCD2-210ENST00000584400 HTATIP2Q9BUP3 242 aa31.78■■■□□ 2.68
SMARCD2-210ENST00000584400 DNAJC25-GNG10A0A024R161 153 aa31.77■■■□□ 2.68
SMARCD2-210ENST00000584400 UBE2Q1Q7Z7E8 422 aa31.77■■■□□ 2.68
SMARCD2-210ENST00000584400 ZNF467Q7Z7K2 595 aaPredicted RBP31.77■■■□□ 2.68
SMARCD2-210ENST00000584400 DDX20Q9UHI6 824 aaKnown RBP31.77■■■□□ 2.68
SMARCD2-210ENST00000584400 SNAP25P60880 206 aa31.76■■■□□ 2.67
SMARCD2-210ENST00000584400 NECTIN1Q15223 517 aa31.76■■■□□ 2.67
SMARCD2-210ENST00000584400 MTA3Q9BTC8 594 aa31.76■■■□□ 2.67
SMARCD2-210ENST00000584400 PFASO15067 1338 aa31.75■■■□□ 2.67
SMARCD2-210ENST00000584400 SLC27A2O14975 620 aa31.75■■■□□ 2.67
SMARCD2-210ENST00000584400 GOLGA8HP0CJ92 632 aa31.75■■■□□ 2.67
SMARCD2-210ENST00000584400 WTAPQ15007 396 aa31.75■■■□□ 2.67
SMARCD2-210ENST00000584400 CREB3L3Q68CJ9 461 aa31.75■■■□□ 2.67
SMARCD2-210ENST00000584400 STOX1Q6ZVD7 989 aa31.75■■■□□ 2.67
SMARCD2-210ENST00000584400 NECAB2Q7Z6G3 386 aa31.75■■■□□ 2.67
SMARCD2-210ENST00000584400 CNPY2Q9Y2B0 182 aa31.75■■■□□ 2.67
SMARCD2-210ENST00000584400 LHX8Q68G74 356 aa31.74■■■□□ 2.67
SMARCD2-210ENST00000584400 TAF6LQ9Y6J9 622 aa31.74■■■□□ 2.67
SMARCD2-210ENST00000584400 WDR19Q8NEZ3 1342 aa31.74■■■□□ 2.67
SMARCD2-210ENST00000584400 POTEB2H3BUK9 544 aa31.73■■■□□ 2.67
SMARCD2-210ENST00000584400 SEPT4O43236 478 aa31.73■■■□□ 2.67
SMARCD2-210ENST00000584400 TMEM67Q5HYA8 995 aa31.73■■■□□ 2.67
SMARCD2-210ENST00000584400 MAMDC4Q6UXC1 1216 aa31.73■■■□□ 2.67
SMARCD2-210ENST00000584400 MB21D2Q8IYB1 491 aaPredicted RBP31.73■■■□□ 2.67
SMARCD2-210ENST00000584400 SYNGAP1Q96PV0 1343 aa31.73■■■□□ 2.67
SMARCD2-210ENST00000584400 MCM5P33992 734 aa31.72■■■□□ 2.67
SMARCD2-210ENST00000584400 UBA5Q9GZZ9 404 aa31.72■■■□□ 2.67
SMARCD2-210ENST00000584400 A1CFQ9NQ94 594 aaKnown RBP31.72■■■□□ 2.67
SMARCD2-210ENST00000584400 TRPV1Q8NER1 839 aa31.71■■■□□ 2.67
SMARCD2-210ENST00000584400 PAWRQ96IZ0 340 aaKnown RBP31.71■■■□□ 2.67
SMARCD2-210ENST00000584400 DHX16O60231 1041 aaKnown RBP31.7■■■□□ 2.67
SMARCD2-210ENST00000584400 PRPF38BQ5VTL8 546 aaKnown RBP31.7■■■□□ 2.67
SMARCD2-210ENST00000584400 CHST3Q7LGC8 479 aa31.7■■■□□ 2.67
SMARCD2-210ENST00000584400 CATIPQ7Z7H3 387 aa31.7■■■□□ 2.67
SMARCD2-210ENST00000584400 TMTC2Q8N394 836 aa31.7■■■□□ 2.67
SMARCD2-210ENST00000584400 BRCA2P51587 3418 aa31.69■■■□□ 2.66
SMARCD2-210ENST00000584400 PRAMEF19Q5SWL8 479 aa31.69■■■□□ 2.66
SMARCD2-210ENST00000584400 FAM133AQ8N9E0 248 aa31.69■■■□□ 2.66
SMARCD2-210ENST00000584400 DPF3Q92784 378 aa31.69■■■□□ 2.66
SMARCD2-210ENST00000584400 TMEM87BQ96K49 555 aa31.69■■■□□ 2.66
SMARCD2-210ENST00000584400 CDC37Q16543 378 aaPredicted RBP31.68■■■□□ 2.66
SMARCD2-210ENST00000584400 MUM1L1Q5H9M0 696 aa31.68■■■□□ 2.66
SMARCD2-210ENST00000584400 NSMFQ6X4W1 530 aa31.68■■■□□ 2.66
SMARCD2-210ENST00000584400 ADGRF4Q8IZF3 695 aa31.68■■■□□ 2.66
SMARCD2-210ENST00000584400 ARRDC4Q8NCT1 418 aa31.68■■■□□ 2.66
SMARCD2-210ENST00000584400 IGDCC4Q8TDY8 1250 aa31.68■■■□□ 2.66
SMARCD2-210ENST00000584400 C11orf49Q9H6J7 331 aa31.68■■■□□ 2.66
SMARCD2-210ENST00000584400 ASB14A6NK59 587 aa31.67■■■□□ 2.66
SMARCD2-210ENST00000584400 PRC1O43663 620 aa31.67■■■□□ 2.66
SMARCD2-210ENST00000584400 ANTXR2P58335 489 aa31.67■■■□□ 2.66
SMARCD2-210ENST00000584400 CYP39A1Q9NYL5 469 aa31.67■■■□□ 2.66
SMARCD2-210ENST00000584400 KLRF2D3W0D1 207 aa31.66■■■□□ 2.66
SMARCD2-210ENST00000584400 AKR1A1P14550 325 aa31.66■■■□□ 2.66
SMARCD2-210ENST00000584400 KRT32Q14532 448 aa31.66■■■□□ 2.66
SMARCD2-210ENST00000584400 MAF1Q9H063 256 aa31.66■■■□□ 2.66
SMARCD2-210ENST00000584400 CPVLQ9H3G5 476 aa31.66■■■□□ 2.66
SMARCD2-210ENST00000584400 ABHD16BQ9H3Z7 469 aa31.66■■■□□ 2.66
SMARCD2-210ENST00000584400 PALM3A6NDB9 673 aaPredicted RBP31.65■■■□□ 2.66
SMARCD2-210ENST00000584400 REC8O95072 547 aa31.65■■■□□ 2.66
SMARCD2-210ENST00000584400 GRM4Q14833 912 aa31.65■■■□□ 2.66
SMARCD2-210ENST00000584400 DIS3LQ8TF46 1054 aaKnown RBP31.65■■■□□ 2.66
SMARCD2-210ENST00000584400 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.65■■■□□ 2.66
SMARCD2-210ENST00000584400 ADD3Q9UEY8 706 aaKnown RBP31.65■■■□□ 2.66
SMARCD2-210ENST00000584400 MAD2L2Q9UI95 211 aa31.65■■■□□ 2.66
SMARCD2-210ENST00000584400 ZNF865P0CJ78 1059 aaPredicted RBP31.64■■■□□ 2.66
SMARCD2-210ENST00000584400 RARBP10826 455 aa31.64■■■□□ 2.66
SMARCD2-210ENST00000584400 CNTN2Q02246 1040 aa31.64■■■□□ 2.66
SMARCD2-210ENST00000584400 TROAPQ12815 778 aa31.64■■■□□ 2.66
SMARCD2-210ENST00000584400 STAG2Q8N3U4 1231 aa31.64■■■□□ 2.66
SMARCD2-210ENST00000584400 NEK1Q96PY6 1258 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms