RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZP2Q05996 745 aa13.41□□□□□ -0.26
CCDC47-206ENST00000584112 CERKLQ49MI3 558 aaPredicted RBP13.41□□□□□ -0.26
CCDC47-206ENST00000584112 TOX2Q96NM4 488 aa13.41□□□□□ -0.26
CCDC47-206ENST00000584112 BOLA2Q9H3K6 86 aa13.41□□□□□ -0.26
CCDC47-206ENST00000584112 ZNFX1Q9P2E3 1918 aaKnown RBP13.41□□□□□ -0.26
CCDC47-206ENST00000584112 ZNF536O15090 1300 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 TMEM221A6NGB7 291 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 M0R296 226 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 GH2P01242 217 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 JAG1P78504 1218 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 FEZ1Q99689 392 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 HAUS7Q99871 368 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 MTIF3Q9H2K0 278 aaKnown RBP13.4□□□□□ -0.26
CCDC47-206ENST00000584112 CABP5Q9NP86 173 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 MCM9Q9NXL9 1143 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 MYH4Q9Y623 1939 aa13.4□□□□□ -0.26
CCDC47-206ENST00000584112 FLNBO75369 2602 aaKnown RBP13.4□□□□□ -0.26
CCDC47-206ENST00000584112 SLC15A5A6NIM6 579 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 C19orf67A6NJJ6 358 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 PTPREP23469 700 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 ADD2P35612 726 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 PLCD1P51178 756 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 USP14P54578 494 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 TAP1Q03518 808 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 ABCB5Q2M3G0 1257 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
CCDC47-206ENST00000584112 TMEM67Q5HYA8 995 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 BMP8AQ7Z5Y6 402 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 SUGP1Q8IWZ8 645 aaKnown RBP13.39□□□□□ -0.27
CCDC47-206ENST00000584112 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
CCDC47-206ENST00000584112 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 FSD1Q9BTV5 496 aa13.39□□□□□ -0.27
CCDC47-206ENST00000584112 COL11A1P12107 1806 aaPredicted RBP13.39□□□□□ -0.27
CCDC47-206ENST00000584112 H3BQ06 376 aaPredicted RBP13.38□□□□□ -0.27
CCDC47-206ENST00000584112 HOXC6P09630 235 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
CCDC47-206ENST00000584112 SHMT1P34896 483 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 RAB3GAP1Q15042 981 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 GDPD5Q8WTR4 605 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 SDR42E1Q8WUS8 393 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 DDRGK1Q96HY6 314 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 C12orf42Q96LP6 360 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 DCTPP1Q9H773 170 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
CCDC47-206ENST00000584112 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 ATP8A2Q9NTI2 1148 aa13.38□□□□□ -0.27
CCDC47-206ENST00000584112 FRYLO94915 3013 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 ZBBXA8MT70 800 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
CCDC47-206ENST00000584112 CNMDO75829 334 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 MBD4O95243 580 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 GABPAQ06546 454 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 UBE3CQ15386 1083 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 HERC4Q5GLZ8 1057 aaPredicted RBP13.37□□□□□ -0.27
CCDC47-206ENST00000584112 LENG1Q96BZ8 264 aaPredicted RBP13.37□□□□□ -0.27
CCDC47-206ENST00000584112 KIAA1683Q9H0B3 1180 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 ARMT1Q9H993 441 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 EMILIN3Q9NT22 766 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 ECHDC1Q9NTX5 307 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 SWAP70Q9UH65 585 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
CCDC47-206ENST00000584112 UMODL1Q5DID0 1318 aa13.37□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 GRB14Q14449 540 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 FBXL6Q8N531 539 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 EDAQ92838 391 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 ZFYVE26Q68DK2 2539 aa13.36□□□□□ -0.27
CCDC47-206ENST00000584112 MPHOSPH10O00566 681 aaKnown RBP13.35□□□□□ -0.27
CCDC47-206ENST00000584112 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
CCDC47-206ENST00000584112 ZYXQ15942 572 aaKnown RBP13.35□□□□□ -0.27
CCDC47-206ENST00000584112 TRIM67Q6ZTA4 783 aa13.35□□□□□ -0.27
CCDC47-206ENST00000584112 MAST4O15021 2626 aa13.34□□□□□ -0.27
CCDC47-206ENST00000584112 VCAM1P19320 739 aa13.34□□□□□ -0.27
CCDC47-206ENST00000584112 SEPT2Q15019 361 aa13.34□□□□□ -0.27
CCDC47-206ENST00000584112 TMEM179Q6ZVK1 233 aa13.34□□□□□ -0.27
CCDC47-206ENST00000584112 RNF180Q86T96 592 aa13.34□□□□□ -0.27
CCDC47-206ENST00000584112 ADHFE1Q8IWW8 467 aa13.34□□□□□ -0.27
CCDC47-206ENST00000584112 UPF3BQ9BZI7 483 aaKnown RBP13.34□□□□□ -0.27
CCDC47-206ENST00000584112 IRF2BPLQ9H1B7 796 aa13.34□□□□□ -0.27
CCDC47-206ENST00000584112 PRKAB2O43741 272 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 CYP2D6P10635 497 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 GUCY1A2P33402 732 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 ACLYP53396 1101 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 CCL23P55773 120 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms