RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	RAVER2	Q9HCJ3	691 aa	Known RBP	11.54	□□□□□ -0.56
NARF-222	ENST00000583908	SLC12A7	Q9Y666	1083 aa		11.54	□□□□□ -0.56
NARF-222	ENST00000583908	ZSWIM8	A7E2V4	1837 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	RLF	Q13129	1914 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	SH2B2	O14492	632 aa	Predicted RBP	11.53	□□□□□ -0.56
NARF-222	ENST00000583908	HOXC6	P09630	235 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	ELN	P15502	786 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	SLC16A2	P36021	539 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	LIFR	P42702	1097 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	OLFML2B	Q68BL8	750 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	DHX32	Q7L7V1	743 aa	Known RBP	11.53	□□□□□ -0.56
NARF-222	ENST00000583908	NUP133	Q8WUM0	1156 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	LZTS2	Q9BRK4	669 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	HOMER2	Q9NSB8	354 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	RNF146	Q9NTX7	359 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	GJD2	Q9UKL4	321 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	DIS3	Q9Y2L1	958 aa	Known RBP	11.53	□□□□□ -0.56
NARF-222	ENST00000583908	PLXNB2	O15031	1838 aa		11.53	□□□□□ -0.56
NARF-222	ENST00000583908	KLRF2	D3W0D1	207 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	MSC	O60682	206 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	PEX10	O60683	326 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	GOLGA8H	P0CJ92	632 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	ALAS1	P13196	640 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	CAP1	Q01518	475 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	GRM4	Q14833	912 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	CDC37	Q16543	378 aa	Predicted RBP	11.52	□□□□□ -0.57
NARF-222	ENST00000583908	CHST3	Q7LGC8	479 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	ZNF654	Q8IZM8	581 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	MSL3	Q8N5Y2	521 aa	Known RBP	11.52	□□□□□ -0.57
NARF-222	ENST00000583908	JAKMIP1	Q96N16	626 aa	Known RBP	11.52	□□□□□ -0.57
NARF-222	ENST00000583908	TRERF1	Q96PN7	1200 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	MAF1	Q9H063	256 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	RNF208	Q9H0X6	261 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	UPF2	Q9HAU5	1272 aa	Known RBP	11.52	□□□□□ -0.57
NARF-222	ENST00000583908	LY9	Q9HBG7	655 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	HMX1	Q9NP08	348 aa	Predicted RBP	11.52	□□□□□ -0.57
NARF-222	ENST00000583908	SEC63	Q9UGP8	760 aa	Known RBP	11.52	□□□□□ -0.57
NARF-222	ENST00000583908	ABCB11	O95342	1321 aa		11.52	□□□□□ -0.57
NARF-222	ENST00000583908	CCDC196	A0A1B0GTZ2	297 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908		B4DLN1	442 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	POTEB2	H3BUK9	544 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	CCL5	P13501	91 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	MRPL12	P52815	198 aa	Known RBP	11.51	□□□□□ -0.57
NARF-222	ENST00000583908	RCAN1	P53805	252 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	ANTXR2	P58335	489 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	TTBK2	Q6IQ55	1244 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	POTEE	Q6S8J3	1075 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
NARF-222	ENST00000583908	RASGRP2	Q7LDG7	609 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	SGMS1	Q86VZ5	419 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	MCF2L2	Q86YR7	1114 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	IGDCC4	Q8TDY8	1250 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	TRIB2	Q92519	343 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	USP6NL	Q92738	828 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	KCNB2	Q92953	911 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	RBM28	Q9NW13	759 aa	Known RBP	11.51	□□□□□ -0.57
NARF-222	ENST00000583908	NRBP1	Q9UHY1	535 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	CNPY2	Q9Y2B0	182 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	TAF6L	Q9Y6J9	622 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	RPTOR	Q8N122	1335 aa		11.51	□□□□□ -0.57
NARF-222	ENST00000583908	COL11A1	P12107	1806 aa	Predicted RBP	11.51	□□□□□ -0.57
NARF-222	ENST00000583908	MYC	P01106	439 aa	Predicted RBP	11.5	□□□□□ -0.57
NARF-222	ENST00000583908	GJB1	P08034	283 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	PRKAR2A	P13861	404 aa	Known RBP	11.5	□□□□□ -0.57
NARF-222	ENST00000583908	CAST	P20810	708 aa	Known RBP	11.5	□□□□□ -0.57
NARF-222	ENST00000583908	SOX10	P56693	466 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	ANAPC15	P60006	121 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	TROAP	Q12815	778 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	PPP2R5B	Q15173	497 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.5	□□□□□ -0.57
NARF-222	ENST00000583908	MICU3	Q86XE3	530 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	FBXO11	Q86XK2	927 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	ADGRF4	Q8IZF3	695 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	AGBL1	Q96MI9	1066 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	AMN	Q9BXJ7	453 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	UBA5	Q9GZZ9	404 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
NARF-222	ENST00000583908	ADD3	Q9UEY8	706 aa	Known RBP	11.5	□□□□□ -0.57
NARF-222	ENST00000583908	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.5	□□□□□ -0.57
NARF-222	ENST00000583908	MRPL11	Q9Y3B7	192 aa	Known RBP	11.5	□□□□□ -0.57
NARF-222	ENST00000583908	SNX14	Q9Y5W7	946 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	CYP46A1	Q9Y6A2	500 aa		11.5	□□□□□ -0.57
NARF-222	ENST00000583908	LOC102724159	A0A0B4J2E5	919 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	PALM3	A6NDB9	673 aa	Predicted RBP	11.49	□□□□□ -0.57
NARF-222	ENST00000583908	ZBTB5	O15062	677 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	ZBTB43	O43298	467 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	SMARCA1	P28370	1054 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	PWP2	Q15269	919 aa	Known RBP	11.49	□□□□□ -0.57
NARF-222	ENST00000583908	USH1G	Q495M9	461 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	NSMF	Q6X4W1	530 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	RRP36	Q96EU6	259 aa	Known RBP	11.49	□□□□□ -0.57
NARF-222	ENST00000583908	MAML3	Q96JK9	1138 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	SPZ1	Q9BXG8	430 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	USP26	Q9BXU7	913 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	TM6SF1	Q9BZW5	370 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	MAD2L2	Q9UI95	211 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	ZNF536	O15090	1300 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	SYNGAP1	Q96PV0	1343 aa		11.49	□□□□□ -0.57
NARF-222	ENST00000583908	PTPDC1	A2A3K4	754 aa		11.48	□□□□□ -0.57
NARF-222	ENST00000583908	ASB14	A6NK59	587 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms