RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 FOXD4L6Q3SYB3 417 aaPredicted RBP20.88■□□□□ 0.93
NDEL1-217ENST00000583683 FOXD4L3Q6VB84 417 aaPredicted RBP20.88■□□□□ 0.93
NDEL1-217ENST00000583683 CLEC17AQ6ZS10 378 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 CCDC12Q8WUD4 166 aaPredicted RBP20.88■□□□□ 0.93
NDEL1-217ENST00000583683 CHAMP1Q96JM3 812 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 ZMYND12Q9H0C1 365 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 COL11A1P12107 1806 aaPredicted RBP20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L15C9J2P7 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L13C9JLJ4 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L11C9JVI0 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L18D6R9N7 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L22D6RA61 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L17D6RBQ6 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L19D6RCP7 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L20D6RJB6 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 USP17L24Q0WX57 530 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 FAM173BQ6P4H8 233 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 GADL1Q6ZQY3 521 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 SAPCD2Q86UD0 394 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 FBXO11Q86XK2 927 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 ZNF784Q8NCA9 323 aaPredicted RBP20.88■□□□□ 0.93
NDEL1-217ENST00000583683 OXER1Q8TDS5 423 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 AMNQ9BXJ7 453 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 FOXP1Q9H334 677 aaPredicted RBP20.88■□□□□ 0.93
NDEL1-217ENST00000583683 ATP6V1DQ9Y5K8 247 aa20.88■□□□□ 0.93
NDEL1-217ENST00000583683 ADAMTS3O15072 1205 aa20.87■□□□□ 0.93
NDEL1-217ENST00000583683 CALML3P27482 149 aa20.87■□□□□ 0.93
NDEL1-217ENST00000583683 NR5A1Q13285 461 aa20.87■□□□□ 0.93
NDEL1-217ENST00000583683 SNAPC2Q13487 334 aa20.87■□□□□ 0.93
NDEL1-217ENST00000583683 PCDHA1Q9Y5I3 950 aa20.87■□□□□ 0.93
NDEL1-217ENST00000583683 ESYT2A0FGR8 921 aa20.86■□□□□ 0.93
NDEL1-217ENST00000583683 KRT2P35908 639 aa20.86■□□□□ 0.93
NDEL1-217ENST00000583683 COG2Q14746 738 aa20.86■□□□□ 0.93
NDEL1-217ENST00000583683 PPP1R18Q6NYC8 613 aa20.86■□□□□ 0.93
NDEL1-217ENST00000583683 SLC38A10Q9HBR0 1119 aa20.86■□□□□ 0.93
NDEL1-217ENST00000583683 PCDHA4Q9UN74 947 aa20.86■□□□□ 0.93
NDEL1-217ENST00000583683 SMCO2A6NFE2 343 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 BAG4O95429 457 aaKnown RBP20.85■□□□□ 0.93
NDEL1-217ENST00000583683 HOXA7P31268 230 aaPredicted RBP20.85■□□□□ 0.93
NDEL1-217ENST00000583683 GNL2Q13823 731 aaKnown RBP20.85■□□□□ 0.93
NDEL1-217ENST00000583683 SPRYD7Q5W111 196 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 GALNT17Q6IS24 598 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 CCDC174Q6PII3 467 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 FASTKD5Q7L8L6 764 aaKnown RBP20.85■□□□□ 0.93
NDEL1-217ENST00000583683 BRAPQ7Z569 592 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 DAGLBQ8NCG7 672 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 MS4A4AQ96JQ5 239 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 ADAMTS5Q9UNA0 930 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 AGTPBP1Q9UPW5 1226 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 ZNF536O15090 1300 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 VWA5AO00534 786 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 ZBTB48P10074 688 aaPredicted RBP20.85■□□□□ 0.93
NDEL1-217ENST00000583683 DSG3P32926 999 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 USH1GQ495M9 461 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 NOSTRINQ8IVI9 506 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 BLIDQ8IZY5 108 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 TNFRSF25Q93038 417 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 ATG4CQ96DT6 458 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 BRMS1Q9HCU9 246 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 MYPNQ86TC9 1320 aa20.85■□□□□ 0.93
NDEL1-217ENST00000583683 M0R2N6 131 aa20.84■□□□□ 0.93
NDEL1-217ENST00000583683 FDX1P10109 184 aa20.84■□□□□ 0.93
NDEL1-217ENST00000583683 TAL1P17542 331 aaPredicted RBP20.84■□□□□ 0.93
NDEL1-217ENST00000583683 GNA11P29992 359 aa20.84■□□□□ 0.93
NDEL1-217ENST00000583683 DNM1Q05193 864 aaKnown RBP20.84■□□□□ 0.93
NDEL1-217ENST00000583683 MKRN3Q13064 507 aaKnown RBP20.84■□□□□ 0.93
NDEL1-217ENST00000583683 C6orf50Q9HD87 102 aa20.84■□□□□ 0.93
NDEL1-217ENST00000583683 ICAM1P05362 532 aa20.83■□□□□ 0.93
NDEL1-217ENST00000583683 GTF2A2P52657 109 aa20.83■□□□□ 0.93
NDEL1-217ENST00000583683 GPAT2Q6NUI2 795 aa20.83■□□□□ 0.93
NDEL1-217ENST00000583683 GBP4Q96PP9 640 aa20.83■□□□□ 0.93
NDEL1-217ENST00000583683 HOXC10Q9NYD6 342 aa20.83■□□□□ 0.93
NDEL1-217ENST00000583683 A0A0G2JMZ2 1700 aa20.83■□□□□ 0.93
NDEL1-217ENST00000583683 SPDYE16A6NNV3 312 aaPredicted RBP20.83■□□□□ 0.92
NDEL1-217ENST00000583683 FSTL1Q12841 308 aa20.83■□□□□ 0.92
NDEL1-217ENST00000583683 TLL2Q9Y6L7 1015 aa20.83■□□□□ 0.92
NDEL1-217ENST00000583683 ZBED4O75132 1171 aa20.82■□□□□ 0.92
NDEL1-217ENST00000583683 CETPP11597 493 aa20.82■□□□□ 0.92
NDEL1-217ENST00000583683 ZNF157P51786 506 aaPredicted RBP20.82■□□□□ 0.92
NDEL1-217ENST00000583683 TRAF1Q13077 416 aa20.82■□□□□ 0.92
NDEL1-217ENST00000583683 EARS2Q5JPH6 523 aaKnown RBP20.82■□□□□ 0.92
NDEL1-217ENST00000583683 MYSM1Q5VVJ2 828 aa20.82■□□□□ 0.92
NDEL1-217ENST00000583683 RASAL3Q86YV0 1011 aa20.82■□□□□ 0.92
NDEL1-217ENST00000583683 REPS2Q8NFH8 660 aa20.82■□□□□ 0.92
NDEL1-217ENST00000583683 AGBL1Q96MI9 1066 aa20.82■□□□□ 0.92
NDEL1-217ENST00000583683 RIC8AQ9NPQ8 531 aa20.82■□□□□ 0.92
NDEL1-217ENST00000583683 ADCY7P51828 1080 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 RGMBQ6NW40 437 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 RASGRP4Q8TDF6 673 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 ASCC2Q9H1I8 757 aaPredicted RBP20.81■□□□□ 0.92
NDEL1-217ENST00000583683 PSTPIP2Q9H939 334 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 RAVER2Q9HCJ3 691 aaKnown RBP20.81■□□□□ 0.92
NDEL1-217ENST00000583683 PCDHA6Q9UN73 950 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 PCDHA8Q9Y5H6 950 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 TMEM88BA6NKF7 163 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 OPLAHO14841 1288 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 NOM1Q5C9Z4 860 aaKnown RBP20.81■□□□□ 0.92
NDEL1-217ENST00000583683 CPXCR1Q8N123 301 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 BICD2Q8TD16 824 aa20.81■□□□□ 0.92
NDEL1-217ENST00000583683 CUL5Q93034 780 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms