RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 PRRT2Q7Z6L0 340 aaPredicted RBP13.86□□□□□ -0.19
GGA3-217ENST00000583667 FOXP4Q8IVH2 680 aaPredicted RBP13.86□□□□□ -0.19
GGA3-217ENST00000583667 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 FAM184AQ8NB25 1140 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 FANCBQ8NB91 859 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 TRIB2Q92519 343 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 LRFN3Q9BTN0 628 aa13.86□□□□□ -0.19
GGA3-217ENST00000583667 ZSCAN16Q9H4T2 348 aaPredicted RBP13.86□□□□□ -0.19
GGA3-217ENST00000583667 DDX4Q9NQI0 724 aaKnown RBP13.86□□□□□ -0.19
GGA3-217ENST00000583667 ATRNL1Q5VV63 1379 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 PLIN4Q96Q06 1357 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
GGA3-217ENST00000583667 CDC27P30260 824 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 ADD1P35611 737 aaKnown RBP13.85□□□□□ -0.19
GGA3-217ENST00000583667 MRPS5P82675 430 aaKnown RBP13.85□□□□□ -0.19
GGA3-217ENST00000583667 GADL1Q6ZQY3 521 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 CATIPQ7Z7H3 387 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 DYNLL2Q96FJ2 89 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 CCDC17Q96LX7 622 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 ZKSCAN3Q9BRR0 538 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 IL17RBQ9NRM6 502 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
GGA3-217ENST00000583667 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 SAP30BPQ9UHR5 308 aaKnown RBP13.85□□□□□ -0.19
GGA3-217ENST00000583667 SERPINB13Q9UIV8 391 aa13.85□□□□□ -0.19
GGA3-217ENST00000583667 HLA-DOAP06340 250 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 RTN1Q16799 776 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 PPP4R3BQ5MIZ7 849 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 ATL3Q6DD88 541 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 PPM1EQ8WY54 764 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 SENP6Q9GZR1 1112 aaPredicted RBP13.84□□□□□ -0.19
GGA3-217ENST00000583667 TMOD2Q9NZR1 351 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 THEGQ9P2T0 379 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 ORC3Q9UBD5 711 aaPredicted RBP13.84□□□□□ -0.19
GGA3-217ENST00000583667 PI4KBQ9UBF8 816 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 PRKAG2Q9UGJ0 569 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 NAP1L2Q9ULW6 460 aaPredicted RBP13.84□□□□□ -0.19
GGA3-217ENST00000583667 ZHX2Q9Y6X8 837 aa13.84□□□□□ -0.19
GGA3-217ENST00000583667 IGKV6D-41A0A0C4DH26 115 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 TSPY3P0CV98 308 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 TSPY8P0CW00 308 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 FUT2Q10981 343 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 NFIAQ12857 509 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 NBR1Q14596 966 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 FAM110CQ1W6H9 321 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 FAM47AQ5JRC9 791 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 MICU3Q86XE3 530 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 STK11IPQ8N1F8 1099 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 CRACR2BQ8N4Y2 399 aaPredicted RBP13.83□□□□□ -0.2
GGA3-217ENST00000583667 FBXO18Q8NFZ0 1043 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 WASF1Q92558 559 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 AFG3L2Q9Y4W6 797 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 MYH1P12882 1939 aa13.83□□□□□ -0.2
GGA3-217ENST00000583667 SMARCA1P28370 1054 aa13.82□□□□□ -0.2
GGA3-217ENST00000583667 PICALMQ13492 652 aa13.82□□□□□ -0.2
GGA3-217ENST00000583667 TATDN1Q6P1N9 297 aa13.82□□□□□ -0.2
GGA3-217ENST00000583667 FAM151AQ8WW52 585 aa13.82□□□□□ -0.2
GGA3-217ENST00000583667 DDX11Q96FC9 970 aa13.82□□□□□ -0.2
GGA3-217ENST00000583667 NECAB3Q96P71 396 aaPredicted RBP13.82□□□□□ -0.2
GGA3-217ENST00000583667 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.82□□□□□ -0.2
GGA3-217ENST00000583667 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
GGA3-217ENST00000583667 LMBRD1Q9NUN5 540 aa13.82□□□□□ -0.2
GGA3-217ENST00000583667 H3BQV1 296 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 PRPF3O43395 683 aaKnown RBP13.81□□□□□ -0.2
GGA3-217ENST00000583667 TRAK2O60296 914 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 CYP2B6P20813 491 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 KIF5BP33176 963 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 SHMT1P34896 483 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 GNAQP50148 359 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
GGA3-217ENST00000583667 CACNB2Q08289 660 aaPredicted RBP13.81□□□□□ -0.2
GGA3-217ENST00000583667 SSRP1Q08945 709 aaKnown RBP13.81□□□□□ -0.2
GGA3-217ENST00000583667 RESTQ13127 1097 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 SH3BP5LQ7L8J4 393 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 FAM177A1Q8N128 213 aaPredicted RBP13.81□□□□□ -0.2
GGA3-217ENST00000583667 SLC44A5Q8NCS7 719 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 BADQ92934 168 aa13.81□□□□□ -0.2
GGA3-217ENST00000583667 VPS37CA5D8V6 355 aaPredicted RBP13.8□□□□□ -0.2
GGA3-217ENST00000583667 NMT2O60551 498 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 DEXIO95424 95 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 TOP1P11387 765 aaKnown RBP13.8□□□□□ -0.2
GGA3-217ENST00000583667 PTPRAP18433 802 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 CCND3P30281 292 aaPredicted RBP13.8□□□□□ -0.2
GGA3-217ENST00000583667 MAP3K10Q02779 954 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 CSPP1Q1MSJ5 1256 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 MCTP1Q6DN14 999 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 ZFPM1Q8IX07 1006 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 TRIM22Q8IYM9 498 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 C8orf76Q96K31 380 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 EPHX3Q9H6B9 360 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 KAT14Q9H8E8 782 aa13.8□□□□□ -0.2
GGA3-217ENST00000583667 HERC5Q9UII4 1024 aaKnown RBP13.8□□□□□ -0.2
GGA3-217ENST00000583667 DDTLA6NHG4 134 aaPredicted RBP13.79□□□□□ -0.2
GGA3-217ENST00000583667 PHF20L1A8MW92 1017 aa13.79□□□□□ -0.2
GGA3-217ENST00000583667 TBC1D12O60347 775 aa13.79□□□□□ -0.2
GGA3-217ENST00000583667 RTP1P59025 263 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms