RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 TMEM259Q4ZIN3 620 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 SPATA1Q5VX52 437 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 KLC3Q6P597 504 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 UNC13DQ70J99 1090 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 NECAB1Q8N987 351 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 PIP4K2CQ8TBX8 421 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 KIFAP3Q92845 792 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 CHMP6Q96FZ7 201 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 CATSPER2Q96P56 530 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 USP28Q96RU2 1077 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 HSD3B7Q9H2F3 369 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.4□□□□□ -0.74
SKA2-207ENST00000583380 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 C2CD2Q9Y426 696 aa10.4□□□□□ -0.74
SKA2-207ENST00000583380 KIF1BO60333 1816 aa10.4□□□□□ -0.75
SKA2-207ENST00000583380 ABCA8O94911 1581 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 N4BP2Q86UW6 1770 aaPredicted RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 ZMYM6O95789 1325 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 ABCC1P33527 1531 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 PALM3A6NDB9 673 aaPredicted RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 DNM1LO00429 736 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 DIAPH2O60879 1101 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 TACC1O75410 805 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 ZNF24P17028 368 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 POLD1P28340 1107 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 PLCD1P51178 756 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 PPP2R2AP63151 447 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 SLC39A14Q15043 492 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 PARP6Q2NL67 630 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 SPDYAQ5MJ70 313 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 HOOK3Q86VS8 718 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 NSUN7Q8NE18 718 aaKnown RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 ZNF570Q96NI8 536 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 GBP5Q96PP8 586 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 NEK1Q96PY6 1258 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 NR1H4Q96RI1 486 aaPredicted RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 CENPKQ9BS16 269 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 EIF2AQ9BY44 585 aaKnown RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 CCDC134Q9H6E4 229 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 C14orf93Q9H972 538 aaKnown RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 TMBIM4Q9HC24 238 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 RMND1Q9NWS8 449 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 TMOD4Q9NZQ9 345 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 HPSEQ9Y251 543 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 LRCH1Q9Y2L9 728 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 LEMD3Q9Y2U8 911 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 THRAP3Q9Y2W1 955 aaKnown RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 SH3GLB1Q9Y371 365 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 EPN1Q9Y6I3 576 aaPredicted RBP10.39□□□□□ -0.75
SKA2-207ENST00000583380 CASZ1Q86V15 1759 aa10.39□□□□□ -0.75
SKA2-207ENST00000583380 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 ADGRB3O60242 1522 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 ATP7AQ04656 1500 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 MAGEA13PA6NCF6 341 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 TMEM221A6NGB7 291 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 LRRC10BA6NIK2 292 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 APBB1O00213 710 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 CES2O00748 559 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 STRNO43815 780 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 PFDN1O60925 122 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 KIF4AO95239 1232 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 ATP1A3P13637 1013 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 HSPA9P38646 679 aaKnown RBP10.38□□□□□ -0.75
SKA2-207ENST00000583380 PBX1P40424 430 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 NEK2P51955 445 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
SKA2-207ENST00000583380 ITGA9Q13797 1035 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 POLA2Q14181 598 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 KRT72Q14CN4 511 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 TTMPQ5BVD1 217 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 ANO1Q5XXA6 986 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 ARHGAP27Q6ZUM4 889 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 PNMA8AQ86V59 439 aaPredicted RBP10.38□□□□□ -0.75
SKA2-207ENST00000583380 PASD1Q8IV76 773 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 TSPYL6Q8N831 410 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 C8orf58Q8NAV2 365 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 HELBQ8NG08 1087 aaPredicted RBP10.38□□□□□ -0.75
SKA2-207ENST00000583380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.38□□□□□ -0.75
SKA2-207ENST00000583380 RHPN1Q8TCX5 695 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 IFT81Q8WYA0 676 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 PTPRN2Q92932 1015 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 DDX27Q96GQ7 796 aaKnown RBP10.38□□□□□ -0.75
SKA2-207ENST00000583380 TIPINQ9BVW5 301 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 GALNT8Q9NY28 637 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 NFE2L3Q9Y4A8 694 aa10.38□□□□□ -0.75
SKA2-207ENST00000583380 CEP170BQ9Y4F5 1589 aaPredicted RBP10.38□□□□□ -0.75
SKA2-207ENST00000583380 ATP6V1G1O75348 118 aa10.37□□□□□ -0.75
SKA2-207ENST00000583380 SKAP2O75563 359 aaPredicted RBP10.37□□□□□ -0.75
SKA2-207ENST00000583380 CLTAP09496 248 aa10.37□□□□□ -0.75
SKA2-207ENST00000583380 UBTFL1P0CB47 393 aaPredicted RBP10.37□□□□□ -0.75
SKA2-207ENST00000583380 FAM200BP0CF97 657 aa10.37□□□□□ -0.75
SKA2-207ENST00000583380 PFKFB1P16118 471 aa10.37□□□□□ -0.75
SKA2-207ENST00000583380 ADKP55263 362 aaKnown RBP10.37□□□□□ -0.75
SKA2-207ENST00000583380 CCDC15Q0P6D6 951 aa10.37□□□□□ -0.75
SKA2-207ENST00000583380 TOB2Q14106 344 aaPredicted RBP10.37□□□□□ -0.75
SKA2-207ENST00000583380 INAQ16352 499 aa10.37□□□□□ -0.75
SKA2-207ENST00000583380 PPP2R5EQ16537 467 aa10.37□□□□□ -0.75
SKA2-207ENST00000583380 CLPPQ16740 277 aaPredicted RBP10.37□□□□□ -0.75
SKA2-207ENST00000583380 CFAP221Q4G0U5 840 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms