RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 STRNO43815 780 aa24.17■■□□□ 1.46
PPP4R1-221ENST00000582240 FDX1P10109 184 aa24.17■■□□□ 1.46
PPP4R1-221ENST00000582240 CCL5P13501 91 aa24.17■■□□□ 1.46
PPP4R1-221ENST00000582240 UBXN2AP68543 259 aa24.17■■□□□ 1.46
PPP4R1-221ENST00000582240 NFXL1Q6ZNB6 911 aa24.17■■□□□ 1.46
PPP4R1-221ENST00000582240 NUP133Q8WUM0 1156 aa24.17■■□□□ 1.46
PPP4R1-221ENST00000582240 MAD2L2Q9UI95 211 aa24.17■■□□□ 1.46
PPP4R1-221ENST00000582240 XRCC5P13010 732 aaKnown RBP24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 OAZ1P54368 228 aa24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 EXOSC10Q01780 885 aaKnown RBP24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 KCTD2Q14681 263 aa24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 ASPRV1Q53RT3 343 aa24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 MUM1L1Q5H9M0 696 aa24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 ADGRF4Q8IZF3 695 aa24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 JAKMIP1Q96N16 626 aaKnown RBP24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 TRERF1Q96PN7 1200 aa24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 RNF146Q9NTX7 359 aa24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 CCPG1Q9ULG6 757 aa24.16■■□□□ 1.46
PPP4R1-221ENST00000582240 DHX16O60231 1041 aaKnown RBP24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 HMGCRP04035 888 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 RXRAP19793 462 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 COPB2P35606 906 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 GRM4Q14833 912 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 SLC35G1Q2M3R5 365 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 CATIPQ7Z7H3 387 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 ZNF654Q8IZM8 581 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 TMEM87BQ96K49 555 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 TMEM106CQ9BVX2 250 aa24.15■■□□□ 1.46
PPP4R1-221ENST00000582240 PALM3A6NDB9 673 aaPredicted RBP24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 KLRF2D3W0D1 207 aa24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 HOXC6P09630 235 aa24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 TROAPQ12815 778 aa24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 KRT32Q14532 448 aa24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 DHX32Q7L7V1 743 aaKnown RBP24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 ABRAQ8N0Z2 381 aa24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 RNF208Q9H0X6 261 aa24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 JMJD4Q9H9V9 463 aa24.14■■□□□ 1.45
PPP4R1-221ENST00000582240 HTTP42858 3142 aa24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 CCDC69A6NI79 296 aa24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 SEC24BO95487 1268 aa24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 ICAM1P05362 532 aa24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 EN2P19622 333 aaPredicted RBP24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 CYP2C19P33261 490 aa24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 CACNB2Q08289 660 aaPredicted RBP24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 CCDC144CPQ8IYA2 1237 aa24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 CHST13Q8NET6 341 aa24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 DDX11Q96FC9 970 aa24.13■■□□□ 1.45
PPP4R1-221ENST00000582240 PRKAR2AP13861 404 aaKnown RBP24.12■■□□□ 1.45
PPP4R1-221ENST00000582240 CDC37Q16543 378 aaPredicted RBP24.12■■□□□ 1.45
PPP4R1-221ENST00000582240 ZNF792Q3KQV3 632 aa24.12■■□□□ 1.45
PPP4R1-221ENST00000582240 ANKRD35Q8N283 1001 aa24.12■■□□□ 1.45
PPP4R1-221ENST00000582240 ACAD9Q9H845 621 aa24.12■■□□□ 1.45
PPP4R1-221ENST00000582240 USH1GQ495M9 461 aa24.11■■□□□ 1.45
PPP4R1-221ENST00000582240 PRAMEF19Q5SWL8 479 aa24.11■■□□□ 1.45
PPP4R1-221ENST00000582240 PIBF1Q8WXW3 757 aa24.11■■□□□ 1.45
PPP4R1-221ENST00000582240 MAML3Q96JK9 1138 aa24.11■■□□□ 1.45
PPP4R1-221ENST00000582240 MTA3Q9BTC8 594 aa24.11■■□□□ 1.45
PPP4R1-221ENST00000582240 CCND3P30281 292 aaPredicted RBP24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 LIFRP42702 1097 aa24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 QRICH1Q2TAL8 776 aa24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 TKFCQ3LXA3 575 aa24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 MFSD14CQ5VZR4 134 aa24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 NSMFQ6X4W1 530 aa24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 TRMT44Q8IYL2 757 aaKnown RBP24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 TMTC2Q8N394 836 aa24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 PURBQ96QR8 312 aaKnown RBP24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 FBXO40Q9UH90 709 aa24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 BRPF3Q9ULD4 1205 aa24.1■■□□□ 1.45
PPP4R1-221ENST00000582240 NFIBO00712 420 aa24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 CNTN2Q02246 1040 aa24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 BLOC1S2Q6QNY1 142 aa24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 CMTR1Q8N1G2 835 aaKnown RBP24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 TRPV1Q8NER1 839 aa24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 DEFB118Q96PH6 123 aa24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.09■■□□□ 1.451e-10■■■■■ 31.6
PPP4R1-221ENST00000582240 A1CFQ9NQ94 594 aaKnown RBP24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 SLC5A4Q9NY91 659 aa24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 SLC12A7Q9Y666 1083 aa24.09■■□□□ 1.45
PPP4R1-221ENST00000582240 DNAJC25-GNG10A0A024R161 153 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 CYTH3O43739 400 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 DDAH1O94760 285 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 PLEKHA8P1O95397 391 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 CASTP20810 708 aaKnown RBP24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 MAP3K21Q5TCX8 1036 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 Q6ZUG5 572 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 HOMER1Q86YM7 354 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 CLEC4DQ8WXI8 215 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 PIGSQ96S52 555 aa24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 HMX1Q9NP08 348 aaPredicted RBP24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 DDX49Q9Y6V7 483 aaKnown RBP24.08■■□□□ 1.45
PPP4R1-221ENST00000582240 RPTORQ8N122 1335 aa24.08■■□□□ 1.44
PPP4R1-221ENST00000582240 EPB41L2O43491 1005 aaKnown RBP24.07■■□□□ 1.44
PPP4R1-221ENST00000582240 IGHA2P01877 340 aa24.07■■□□□ 1.44
PPP4R1-221ENST00000582240 RPS6KB1P23443 525 aa24.07■■□□□ 1.44
PPP4R1-221ENST00000582240 OLFML2BQ68BL8 750 aa24.07■■□□□ 1.44
PPP4R1-221ENST00000582240 MICU3Q86XE3 530 aa24.07■■□□□ 1.44
PPP4R1-221ENST00000582240 CTCFLQ8NI51 663 aaPredicted RBP24.07■■□□□ 1.44
PPP4R1-221ENST00000582240 FGD4Q96M96 766 aa24.07■■□□□ 1.44
PPP4R1-221ENST00000582240 NAP1L2Q9ULW6 460 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms