RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 RANBP17Q9H2T7 1088 aaKnown RBP12.15□□□□□ -0.46
TOP3A-212ENST00000582122 GPCPD1Q9NPB8 672 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 BIN2Q9UBW5 565 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-212ENST00000582122 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 CENPFP49454 3210 aa12.15□□□□□ -0.47
TOP3A-212ENST00000582122 PFASO15067 1338 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 TRIOBPQ9H2D6 2365 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 CEP290O15078 2479 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 SH2B2O14492 632 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-212ENST00000582122 HMGCRP04035 888 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 FXR1P51114 621 aaKnown RBP eCLIP12.14□□□□□ -0.47
TOP3A-212ENST00000582122 ANTXR2P58335 489 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 TROAPQ12815 778 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 MFSD14CQ5VZR4 134 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 ZNF654Q8IZM8 581 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 MSL3Q8N5Y2 521 aaKnown RBP12.14□□□□□ -0.47
TOP3A-212ENST00000582122 USP6NLQ92738 828 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 MMP19Q99542 508 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 ACAD9Q9H845 621 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 LY9Q9HBG7 655 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 RAVER2Q9HCJ3 691 aaKnown RBP12.14□□□□□ -0.47
TOP3A-212ENST00000582122 GABRQQ9UN88 632 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 TAF6LQ9Y6J9 622 aa12.14□□□□□ -0.47
TOP3A-212ENST00000582122 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-212ENST00000582122 CCDC196A0A1B0GTZ2 297 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-212ENST00000582122 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 DHX16O60231 1041 aaKnown RBP12.13□□□□□ -0.47
TOP3A-212ENST00000582122 ADORA2AP29274 412 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 CAP1Q01518 475 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 EXOSC10Q01780 885 aaKnown RBP12.13□□□□□ -0.47
TOP3A-212ENST00000582122 GRM4Q14833 912 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 CHST3Q7LGC8 479 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 ZNF333Q96JL9 665 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 JAKMIP1Q96N16 626 aaKnown RBP12.13□□□□□ -0.47
TOP3A-212ENST00000582122 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 CYP46A1Q9Y6A2 500 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 DOCK3Q8IZD9 2030 aa12.13□□□□□ -0.47
TOP3A-212ENST00000582122 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 LOC102724159A0A0B4J2E5 919 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 ECM2O94769 699 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-212ENST00000582122 EN2P19622 333 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-212ENST00000582122 CYP2B6P20813 491 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 SLC16A2P36021 539 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 PWP2Q15269 919 aaKnown RBP12.12□□□□□ -0.47
TOP3A-212ENST00000582122 OLFML2BQ68BL8 750 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 TTBK2Q6IQ55 1244 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 ADGRF4Q8IZF3 695 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 ANKRD35Q8N283 1001 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 SAMD3Q8N6K7 520 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
TOP3A-212ENST00000582122 RBM28Q9NW13 759 aaKnown RBP12.12□□□□□ -0.47
TOP3A-212ENST00000582122 NRBP1Q9UHY1 535 aa12.12□□□□□ -0.47
TOP3A-212ENST00000582122 ZNF536O15090 1300 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 B4DLN1 442 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 PEX10O60683 326 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 GOLGA8HP0CJ92 632 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 ALAS1P13196 640 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 CASTP20810 708 aaKnown RBP12.11□□□□□ -0.47
TOP3A-212ENST00000582122 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 MRPL12P52815 198 aaKnown RBP12.11□□□□□ -0.47
TOP3A-212ENST00000582122 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-212ENST00000582122 FBXO11Q86XK2 927 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 MCF2L2Q86YR7 1114 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 NUP133Q8WUM0 1156 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 TRERF1Q96PN7 1200 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 MPHOSPH6Q99547 160 aaKnown RBP12.11□□□□□ -0.47
TOP3A-212ENST00000582122 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 RNF146Q9NTX7 359 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 MRPL11Q9Y3B7 192 aaKnown RBP12.11□□□□□ -0.47
TOP3A-212ENST00000582122 COL11A1P12107 1806 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-212ENST00000582122 ABCB11O95342 1321 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
TOP3A-212ENST00000582122 ZBTB5O15062 677 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 ZBTB43O43298 467 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 MSCO60682 206 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 INHAP05111 366 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 ANKRD1Q15327 319 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 CDC37Q16543 378 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-212ENST00000582122 APOA5Q6Q788 366 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 TEX2Q8IWB9 1127 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 FANCBQ8NB91 859 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 SH3TC2Q8TF17 1288 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 CHMP4CQ96CF2 233 aa12.1□□□□□ -0.47
TOP3A-212ENST00000582122 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms