RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 PCNTO95613 3336 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 PALM3A6NDB9 673 aaPredicted RBP10.61□□□□□ -0.71
SS18-220ENST00000582092 hCG_1984214I3L0E3 225 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 SHMT1P34896 483 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 GTF2A2P52657 109 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 CCDC173Q0VFZ6 552 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 IKQ13123 557 aaPredicted RBP10.61□□□□□ -0.71
SS18-220ENST00000582092 NR5A1Q13285 461 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 USP17L2Q6R6M4 530 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 TMEM179Q6ZVK1 233 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 ERO1BQ86YB8 467 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 CKAP2LQ8IYA6 745 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 BLIDQ8IZY5 108 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 STAG2Q8N3U4 1231 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 ZNF713Q8N859 430 aaPredicted RBP10.61□□□□□ -0.71
SS18-220ENST00000582092 RNF214Q8ND24 703 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.61□□□□□ -0.71
SS18-220ENST00000582092 CLMNQ96JQ2 1002 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 WRNIP1Q96S55 665 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 RBSNQ9H1K0 784 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 ELP3Q9H9T3 547 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 FAM198AQ9UFP1 575 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 PCDHA4Q9UN74 947 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 FZD1Q9UP38 647 aa10.61□□□□□ -0.71
SS18-220ENST00000582092 CDK5RAP2Q96SN8 1893 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 DDTLA6NHG4 134 aaPredicted RBP10.6□□□□□ -0.71
SS18-220ENST00000582092 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 CAVIN2O95810 425 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 SYKP43405 635 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 TRAPPC10P48553 1259 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 PIK3AP1Q6ZUJ8 805 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 ZFPM1Q8IX07 1006 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 LRRC47Q8N1G4 583 aaKnown RBP10.6□□□□□ -0.71
SS18-220ENST00000582092 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 OPTNQ96CV9 577 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 NAT10Q9H0A0 1025 aaKnown RBP10.6□□□□□ -0.71
SS18-220ENST00000582092 ARHGEF10LQ9HCE6 1279 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.6□□□□□ -0.71
SS18-220ENST00000582092 NYAP2Q9P242 653 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 PLIN4Q96Q06 1357 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 MYH15Q9Y2K3 1946 aa10.6□□□□□ -0.71
SS18-220ENST00000582092 FRMPD2Q68DX3 1309 aaPredicted RBP10.59□□□□□ -0.71
SS18-220ENST00000582092 SMCO2A6NFE2 343 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 ZNF202O95125 648 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 SLC1A4P43007 532 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 ICA1Q05084 483 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 TYRO3Q06418 890 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 VGLL4Q14135 290 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 NOM1Q5C9Z4 860 aaKnown RBP10.59□□□□□ -0.71
SS18-220ENST00000582092 TTC38Q5R3I4 469 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 KANK3Q6NY19 840 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.59□□□□□ -0.71
SS18-220ENST00000582092 MIGA2Q7L4E1 593 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 KRT25Q7Z3Z0 450 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 DCAF4Q8WV16 495 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 GPKOWQ92917 476 aaPredicted RBP eCLIP10.59□□□□□ -0.71
SS18-220ENST00000582092 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 BARHL2Q9NY43 387 aa10.59□□□□□ -0.71
SS18-220ENST00000582092 FOCADQ5VW36 1801 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 MYH8P13535 1937 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 SPDYE5A6NIY4 337 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 GOLGA6L19H0YKK7 550 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 PTMAP06454 111 aaKnown RBP10.58□□□□□ -0.72
SS18-220ENST00000582092 PDHBP11177 359 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 CETPP11597 493 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 EEF2P13639 858 aaKnown RBP10.58□□□□□ -0.72
SS18-220ENST00000582092 PFKFB1P16118 471 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 TXLNAP40222 546 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 NDUFA8P51970 172 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 TPM4P67936 248 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 PPATQ06203 517 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 TRAF1Q13077 416 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 DGKZQ13574 1117 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 ARHGEF6Q15052 776 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 ZNF174Q15697 407 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 STX1AQ16623 288 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 SLFN13Q68D06 897 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 TATDN1Q6P1N9 297 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 FERMT2Q96AC1 680 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 OTUD5Q96G74 571 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 TIGD1Q96MW7 591 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 PIGSQ96S52 555 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 PYM1Q9BRP8 204 aaKnown RBP10.58□□□□□ -0.72
SS18-220ENST00000582092 CFHR5Q9BXR6 569 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 GLT8D2Q9H1C3 349 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 GOLPH3LQ9H4A5 285 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 SH2D4AQ9H788 454 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 GOPCQ9HD26 462 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 PICK1Q9NRD5 415 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 ANO10Q9NW15 660 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 PCDHB6Q9Y5E3 794 aa10.58□□□□□ -0.72
SS18-220ENST00000582092 CCL15-CCL14A0A0B4J2E2 113 aa10.57□□□□□ -0.72
SS18-220ENST00000582092 PNMA6FA0A0J9YX94 578 aa10.57□□□□□ -0.72
SS18-220ENST00000582092 FAM196BA6NMK8 535 aa10.57□□□□□ -0.72
SS18-220ENST00000582092 BECN2A8MW95 431 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms