RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 BMP8BP34820 402 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 CTSKP43235 329 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 PWP1Q13610 501 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 NR1I3Q14994 352 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 JMJD8Q96S16 334 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 USP40Q9NVE5 1235 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 PCDHB14Q9Y5E9 798 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 MINDY4BA8MYZ0 360 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 CLEC3AO75596 197 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 MSL3P1P0C860 447 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 CWF19L2Q2TBE0 894 aaKnown RBP8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 CDCP2Q5VXM1 449 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 LSRQ86X29 649 aaPredicted RBP8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 ADGRG2Q8IZP9 1017 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 CRELD1Q96HD1 420 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 GFOD1Q9NXC2 390 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 SUSD2Q9UGT4 822 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
SMCHD1-207ENST00000581711 A0A1B0GTL3 188 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 TARBP2Q15633 366 aaKnown RBP8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 ZNF827Q17R98 1081 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 NT5DC1Q5TFE4 455 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 LIPIQ6XZB0 460 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 TMC4Q7Z404 712 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 FERMT3Q86UX7 667 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 TMEM52Q8NDY8 209 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 FNIP1Q8TF40 1166 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 SPATA25Q9BR10 227 aa8.03□□□□□ -1.12
SMCHD1-207ENST00000581711 ATE1O95260 518 aa8.02□□□□□ -1.13
SMCHD1-207ENST00000581711 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
SMCHD1-207ENST00000581711 VAV1P15498 845 aa8.02□□□□□ -1.13
SMCHD1-207ENST00000581711 FBLN1P23142 703 aa8.02□□□□□ -1.13
SMCHD1-207ENST00000581711 CRTC3Q6UUV7 619 aa8.02□□□□□ -1.13
SMCHD1-207ENST00000581711 CNNM2Q9H8M5 875 aa8.02□□□□□ -1.13
SMCHD1-207ENST00000581711 BRMS1Q9HCU9 246 aa8.02□□□□□ -1.13
SMCHD1-207ENST00000581711 XPCQ01831 940 aaPredicted RBP8.01□□□□□ -1.13
SMCHD1-207ENST00000581711 MVKQ03426 396 aa8.01□□□□□ -1.13
SMCHD1-207ENST00000581711 LRRC3Q9BY71 257 aa8.01□□□□□ -1.13
SMCHD1-207ENST00000581711 MKRN2Q9H000 416 aaKnown RBP8.01□□□□□ -1.13
SMCHD1-207ENST00000581711 PLA2G2DQ9UNK4 145 aa8.01□□□□□ -1.13
SMCHD1-207ENST00000581711 PCDHB12Q9Y5F1 795 aa8.01□□□□□ -1.13
SMCHD1-207ENST00000581711 PATL2C9JE40 543 aaKnown RBP8□□□□□ -1.13
SMCHD1-207ENST00000581711 CCNFP41002 786 aa8□□□□□ -1.13
SMCHD1-207ENST00000581711 MAGEA10P43363 369 aaPredicted RBP8□□□□□ -1.13
SMCHD1-207ENST00000581711 FOXO4P98177 505 aa8□□□□□ -1.13
SMCHD1-207ENST00000581711 ATG4CQ96DT6 458 aa8□□□□□ -1.13
SMCHD1-207ENST00000581711 GZF1Q9H116 711 aaPredicted RBP8□□□□□ -1.13
SMCHD1-207ENST00000581711 HCFC2Q9Y5Z7 792 aa8□□□□□ -1.13
SMCHD1-207ENST00000581711 PMF1-BGLAPU3KQ54 211 aa8□□□□□ -1.13
SMCHD1-207ENST00000581711 A0A1W2PQ27 194 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 A0A1W2PQ64 194 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 A0A1W2PQC6 194 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 A0A1W2PQD8 194 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 CYBBP04839 570 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 DBHP09172 617 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 RTP2Q5QGT7 225 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 FBXL19Q6PCT2 694 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 PAQR3Q6TCH7 311 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 NLRC3Q7RTR2 1065 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 SAPCD2Q86UD0 394 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 FBXL21Q9UKT6 434 aa7.99□□□□□ -1.13
SMCHD1-207ENST00000581711 ROBO2Q9HCK4 1378 aa7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 SH3D21A4FU49 640 aa7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 SRGAP3O43295 1099 aa7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 AKAP8O43823 692 aaKnown RBP7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 ATF2P15336 505 aa7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 TNFRSF1AP19438 455 aa7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 HTRA3P83110 453 aa7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 TMEM192Q8IY95 271 aa7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 ZNF526Q8TF50 670 aaPredicted RBP7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 EHMT1Q9H9B1 1298 aa7.98□□□□□ -1.13
SMCHD1-207ENST00000581711 SND1Q7KZF4 910 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMCHD1-207ENST00000581711 NAT16Q8N8M0 369 aa7.97□□□□□ -1.13
SMCHD1-207ENST00000581711 KCNQ5Q9NR82 932 aa7.97□□□□□ -1.13
SMCHD1-207ENST00000581711 KBTBD4Q9NVX7 518 aa7.97□□□□□ -1.13
SMCHD1-207ENST00000581711 PRR13Q9NZ81 148 aa7.97□□□□□ -1.13
SMCHD1-207ENST00000581711 FAN1Q9Y2M0 1017 aa7.97□□□□□ -1.13
SMCHD1-207ENST00000581711 DUSP10Q9Y6W6 482 aa7.97□□□□□ -1.13
SMCHD1-207ENST00000581711 GSNP06396 782 aa7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 CNR2P34972 360 aa7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 ADAM17P78536 824 aa7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 ZXDAP98168 799 aa7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 DLX2Q07687 328 aaPredicted RBP7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 AUHQ13825 339 aaKnown RBP7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 HLA-DQA1Q5Y7H0 255 aa7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 JAMLQ86YT9 394 aa7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 SLC6A18Q96N87 628 aa7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 RNF38Q9H0F5 515 aa7.96□□□□□ -1.14
SMCHD1-207ENST00000581711 SORBS3O60504 671 aa7.95□□□□□ -1.14
SMCHD1-207ENST00000581711 TRIM26Q12899 539 aaPredicted RBP7.95□□□□□ -1.14
SMCHD1-207ENST00000581711 BICRALQ6AI39 1079 aa7.95□□□□□ -1.14
SMCHD1-207ENST00000581711 DDX1Q92499 740 aaKnown RBP7.95□□□□□ -1.14
SMCHD1-207ENST00000581711 SLC12A9Q9BXP2 914 aa7.95□□□□□ -1.14
SMCHD1-207ENST00000581711 SMPD4Q9NXE4 827 aa7.95□□□□□ -1.14
SMCHD1-207ENST00000581711 SUPT16HQ9Y5B9 1047 aaKnown RBP7.95□□□□□ -1.14
SMCHD1-207ENST00000581711 A0A1W2PQJ5 194 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms