RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 HLA-CQ95604 372 aa15.19■□□□□ 0.02
CSNK1D-218ENST00000581655 SCLYQ96I15 445 aa15.19■□□□□ 0.02
CSNK1D-218ENST00000581655 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
CSNK1D-218ENST00000581655 FGD4Q96M96 766 aa15.19■□□□□ 0.02
CSNK1D-218ENST00000581655 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
CSNK1D-218ENST00000581655 SMIM22K7EJ46 135 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 BCAR3O75815 825 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 PDE6AP16499 860 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 ITGA7Q13683 1181 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 ARMCX2Q7L311 632 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 VWCEQ96DN2 955 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 TRPV6Q9H1D0 765 aa15.18■□□□□ 0.02
CSNK1D-218ENST00000581655 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 PI4K2BG5E9Z4 385 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 B4GALT4O60513 344 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 TRIM27P14373 513 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 CDK8P49336 464 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 NKX3-2P78367 333 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 TTLL4Q14679 1199 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 NOL8Q76FK4 1167 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 CPXCR1Q8N123 301 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 CLUAP1Q96AJ1 413 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 SLF1Q9BQI6 1058 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 CD320Q9NPF0 282 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 ASTN1O14525 1302 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 ZNF532Q9HCE3 1301 aa15.17■□□□□ 0.02
CSNK1D-218ENST00000581655 SCN5AQ14524 2016 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 CYP2D7A0A087X1C5 515 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 CABYRO75952 493 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 ATP8B2P98198 1209 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 CCDC144CPQ8IYA2 1237 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 ANKRD35Q8N283 1001 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 ARNTL2Q8WYA1 636 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 KANSL2Q9H9L4 492 aa15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 NOP58Q9Y2X3 529 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-218ENST00000581655 PRKAB2O43741 272 aa15.15■□□□□ 0.02
CSNK1D-218ENST00000581655 ARHGEF15O94989 841 aa15.15■□□□□ 0.02
CSNK1D-218ENST00000581655 MRE11P49959 708 aa15.15■□□□□ 0.02
CSNK1D-218ENST00000581655 TNFAIP2Q03169 654 aa15.15■□□□□ 0.02
CSNK1D-218ENST00000581655 TTF1Q15361 905 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-218ENST00000581655 TLK2Q86UE8 772 aa15.15■□□□□ 0.02
CSNK1D-218ENST00000581655 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
CSNK1D-218ENST00000581655 ARMT1Q9H993 441 aa15.15■□□□□ 0.02
CSNK1D-218ENST00000581655 TCRBV5S4A2TA0A5A2 114 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 PRR33A8MZF0 331 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 PTGS1P23219 599 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 PSMC6P62333 389 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 TAP1Q03518 808 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 FSCN1Q16658 493 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 C12orf60Q5U649 245 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 C16orf86Q6ZW13 317 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.14■□□□□ 0.017e-6■□□□□ 10.8
CSNK1D-218ENST00000581655 DEFB128Q7Z7B8 93 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 C1orf115Q9H7X2 142 aa15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 RAVER2Q9HCJ3 691 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 GNEQ9Y223 722 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-218ENST00000581655 ATP2A1O14983 1001 aa15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 PFKMP08237 780 aa15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 CNTN2Q02246 1040 aa15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 GRB10Q13322 594 aa15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 AACSQ86V21 672 aa15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 PRPF38AQ8NAV1 312 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 SNX27Q96L92 541 aa15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 SEZ6LQ9BYH1 1024 aa15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 AP5M1Q9H0R1 490 aa15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 CTDP1Q9Y5B0 961 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-218ENST00000581655 COL4A4P53420 1690 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 USP17L12C9JPN9 530 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 USP17L21D6R901 530 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 DYNC1LI2O43237 492 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 ZEB2O60315 1214 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 ZBED4O75132 1171 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 CYP2C9P11712 490 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 SPRED2Q7Z698 418 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 TMEM57Q8N5G2 664 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 UIMC1Q96RL1 719 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 SLC9A7Q96T83 725 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 ALDH8A1Q9H2A2 487 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 ATP8A2Q9NTI2 1148 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 FBXO40Q9UH90 709 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 WDFY4Q6ZS81 3184 aa15.12■□□□□ 0.01
CSNK1D-218ENST00000581655 TET1Q8NFU7 2136 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 F5H6K3 240 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 GOLIM4O00461 696 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 LPXNO60711 386 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 MBD4O95243 580 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 ACTN1P12814 892 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 KLRC3Q07444 240 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 SLFNL1Q499Z3 407 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 AMOTL1Q8IY63 956 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 CHST13Q8NET6 341 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
CSNK1D-218ENST00000581655 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms