RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 NAT16Q8N8M0 369 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 SRPK1Q96SB4 655 aaKnown RBP6.75□□□□□ -1.33
NF1-220ENST00000581113 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 CTNND2Q9UQB3 1225 aa6.75□□□□□ -1.33
NF1-220ENST00000581113 TBX1O43435 398 aa6.74□□□□□ -1.33
NF1-220ENST00000581113 GDNFP39905 211 aa6.74□□□□□ -1.33
NF1-220ENST00000581113 TRIM59Q8IWR1 403 aa6.74□□□□□ -1.33
NF1-220ENST00000581113 ST13P5Q8NFI4 369 aaPredicted RBP6.74□□□□□ -1.33
NF1-220ENST00000581113 DEPDC7Q96QD5 511 aa6.74□□□□□ -1.33
NF1-220ENST00000581113 MCMBPQ9BTE3 642 aa6.74□□□□□ -1.33
NF1-220ENST00000581113 OSBPL2Q9H1P3 480 aa6.74□□□□□ -1.33
NF1-220ENST00000581113 EBF1Q9UH73 591 aa6.74□□□□□ -1.33
NF1-220ENST00000581113 ZNF281Q9Y2X9 895 aa6.74□□□□□ -1.33
NF1-220ENST00000581113 ERVFC1P60507 584 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 MTERF2Q49AM1 385 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 GTF2IRD2BQ6EKJ0 949 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 GTF2IRD2Q86UP8 949 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 MAP6Q96JE9 813 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 FCRL2Q96LA5 508 aaPredicted RBP6.73□□□□□ -1.33
NF1-220ENST00000581113 MRGPRX3Q96LB0 322 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 G6PC3Q9BUM1 346 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 CCDC113Q9H0I3 377 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 ERVK13-1Q9NX77 482 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 SNTG2Q9NY99 539 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 AURKAO14965 403 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 USP2O75604 605 aaPredicted RBP6.73□□□□□ -1.33
NF1-220ENST00000581113 RAC2P15153 192 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 SEPHS1P49903 392 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 RASGRF1Q13972 1273 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 RASA3Q14644 834 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 SPATC1Q76KD6 591 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 OXR1Q8N573 874 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 PDZD8Q8NEN9 1154 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 BTN2A2Q8WVV5 523 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 LINC01599Q8WXQ3 324 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 LNPKQ9C0E8 428 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 ZSWIM4Q9H7M6 989 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 PFDN2Q9UHV9 154 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 BACE2Q9Y5Z0 518 aa6.73□□□□□ -1.33
NF1-220ENST00000581113 A0A1W2PQU0 124 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 IQCA1LA6NCM1 817 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 C2orf71A6NGG8 1288 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 IFRD2Q12894 506 aaPredicted RBP6.72□□□□□ -1.33
NF1-220ENST00000581113 BMS1Q14692 1282 aaKnown RBP6.72□□□□□ -1.33
NF1-220ENST00000581113 XP32Q5T750 250 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 CEP128Q6ZU80 1094 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 ATG4DQ86TL0 474 aaPredicted RBP6.72□□□□□ -1.33
NF1-220ENST00000581113 ANKS4BQ8N8V4 417 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 FLAD1Q8NFF5 587 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 MYLIPQ8WY64 445 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 HHIPL1Q96JK4 782 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 C19orf44Q9H6X5 657 aa6.72□□□□□ -1.33
NF1-220ENST00000581113 CWC22Q9HCG8 908 aaKnown RBP6.72□□□□□ -1.33
NF1-220ENST00000581113 FITM1A5D6W6 292 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 BIN1O00499 593 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 FGF10O15520 208 aaPredicted RBP6.71□□□□□ -1.34
NF1-220ENST00000581113 TRHRP34981 398 aaPredicted RBP6.71□□□□□ -1.34
NF1-220ENST00000581113 AFMP43652 599 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 PPP2R2AP63151 447 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 CHRNEQ04844 493 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 SCRN1Q12765 414 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 SLC14A2Q15849 920 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 CCDC144BQ3MJ40 725 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 EEF1DP3Q658K8 133 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 SPPL2CQ8IUH8 684 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 KSR1Q8IVT5 923 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 MKL1Q969V6 931 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 PTCHD1Q96NR3 888 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 NKX2-4Q9H2Z4 354 aa6.71□□□□□ -1.34
NF1-220ENST00000581113 HPXP02790 462 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 SNRPB2P08579 225 aaKnown RBP6.7□□□□□ -1.34
NF1-220ENST00000581113 KIR2DL1P43626 348 aaPredicted RBP6.7□□□□□ -1.34
NF1-220ENST00000581113 KIR2DL2P43627 348 aaPredicted RBP6.7□□□□□ -1.34
NF1-220ENST00000581113 KCNJ6P48051 423 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 SSRP1Q08945 709 aaKnown RBP6.7□□□□□ -1.34
NF1-220ENST00000581113 NFE2L2Q16236 605 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 FYB2Q5VWT5 728 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 CYP2R1Q6VVX0 501 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 DPH6Q7L8W6 267 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 LRP10Q7Z4F1 713 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 LRRC47Q8N1G4 583 aaKnown RBP6.7□□□□□ -1.34
NF1-220ENST00000581113 SGSM3Q96HU1 749 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 KIRREL1Q96J84 757 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 GPRC5CQ9NQ84 441 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 TNFRSF10DQ9UBN6 386 aa6.7□□□□□ -1.34
NF1-220ENST00000581113 CDK11AQ9UQ88 783 aaPredicted RBP6.7□□□□□ -1.34
NF1-220ENST00000581113 TBC1D8O95759 1140 aa6.69□□□□□ -1.34
NF1-220ENST00000581113 GRIA2P42262 883 aa6.69□□□□□ -1.34
NF1-220ENST00000581113 RTP1P59025 263 aa6.69□□□□□ -1.34
NF1-220ENST00000581113 HSP90AA2PQ14568 343 aaPredicted RBP6.69□□□□□ -1.34
NF1-220ENST00000581113 SF1Q15637 639 aaKnown RBP6.69□□□□□ -1.34
NF1-220ENST00000581113 TIGD5Q53EQ6 642 aa6.69□□□□□ -1.34
NF1-220ENST00000581113 TMEM52Q8NDY8 209 aa6.69□□□□□ -1.34
NF1-220ENST00000581113 ABHD4Q8TB40 342 aa6.69□□□□□ -1.34
NF1-220ENST00000581113 ZNF669Q96BR6 464 aaPredicted RBP6.69□□□□□ -1.34
NF1-220ENST00000581113 DNAJC7Q99615 494 aa6.69□□□□□ -1.34
NF1-220ENST00000581113 SPATA9Q9BWV2 254 aa6.69□□□□□ -1.34
NF1-220ENST00000581113 CYP26B1Q9NR63 512 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms