RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 TRIM43Q96BQ3 446 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-218ENST00000580745 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-218ENST00000580745 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-218ENST00000580745 RWDD1Q9H446 243 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-218ENST00000580745 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
PPP4R1-218ENST00000580745 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
PPP4R1-218ENST00000580745 PHF24Q9UPV7 400 aa13.17□□□□□ -0.3
PPP4R1-218ENST00000580745 LAMA3Q16787 3333 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 ALAS1P13196 640 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 SDSP20132 328 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 ITGB8P26012 769 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 NOVP48745 357 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 OAZ1P54368 228 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 NUCB1Q02818 461 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 ACVR2BQ13705 512 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 LRIT3Q3SXY7 679 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 RCSD1Q6JBY9 416 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 RNF180Q86T96 592 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 CHURC1Q8WUH1 139 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 BADQ92934 168 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 PDLIM7Q9NR12 457 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
PPP4R1-218ENST00000580745 ASTN1O14525 1302 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 FRMPD2Q68DX3 1309 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 MYH7P12883 1935 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 TMEM63BQ5T3F8 832 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 FAM133AQ8N9E0 248 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 KLHDC9Q8NEP7 349 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 KATNBL1Q9H079 304 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 ACAD9Q9H845 621 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 PRKAG2Q9UGJ0 569 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 FBXO40Q9UH90 709 aa13.15□□□□□ -0.3
PPP4R1-218ENST00000580745 NEDD4P46934 1319 aa13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 PQBP1O60828 265 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 KCNA10Q16322 511 aa13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 CCSAPQ6IQ19 270 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 DEFB123Q8N688 67 aa13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 ZKSCAN3Q9BRR0 538 aa13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 SUPT16HQ9Y5B9 1047 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-218ENST00000580745 PLA2G6O60733 806 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 ACLYP53396 1101 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 EPHB4P54760 987 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 IRX6P78412 446 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 SHHQ15465 462 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 C1orf53Q5VUE5 145 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 NSMFQ6X4W1 530 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 EEPD1Q7L9B9 569 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 IL25Q9H293 177 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 OSBPL3Q9H4L5 887 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 CCPG1Q9ULG6 757 aa13.13□□□□□ -0.31
PPP4R1-218ENST00000580745 PARP14Q460N5 1801 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 NFIBO00712 420 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 CTAGE5O15320 804 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 FDX1P10109 184 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 PDE4AP27815 886 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 BEX3Q00994 111 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 AAMPQ13685 434 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 SYDE2Q5VT97 1194 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 STARD7Q9NQZ5 370 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 PDGFCQ9NRA1 345 aa13.12□□□□□ -0.31
PPP4R1-218ENST00000580745 ICAM1P05362 532 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 CLTBP09497 229 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 PDHBP11177 359 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 FAAP100Q0VG06 881 aa13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 BAATQ14032 418 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-218ENST00000580745 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms