RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 SLC4A7Q9Y6M7 1214 aa12.95□□□□□ -0.34
TOP3A-210ENST00000580713 A0A0G2JMZ2 1700 aa12.94□□□□□ -0.34
TOP3A-210ENST00000580713 RFXAPO00287 272 aa12.94□□□□□ -0.34
TOP3A-210ENST00000580713 VWA5AO00534 786 aa12.94□□□□□ -0.34
TOP3A-210ENST00000580713 SNAI1O95863 264 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-210ENST00000580713 CST5P28325 142 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-210ENST00000580713 ACVR2BQ13705 512 aa12.94□□□□□ -0.34
TOP3A-210ENST00000580713 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
TOP3A-210ENST00000580713 CLUAP1Q96AJ1 413 aa12.94□□□□□ -0.34
TOP3A-210ENST00000580713 CRBNQ96SW2 442 aa12.94□□□□□ -0.34
TOP3A-210ENST00000580713 PCDHA11Q9Y5I1 949 aa12.94□□□□□ -0.34
TOP3A-210ENST00000580713 PIEZO1Q92508 2521 aa12.94□□□□□ -0.34
TOP3A-210ENST00000580713 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
TOP3A-210ENST00000580713 CYP2D6P10635 497 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 AKR1B1P15121 316 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 NOL8Q76FK4 1167 aaKnown RBP12.93□□□□□ -0.34
TOP3A-210ENST00000580713 SIAH1Q8IUQ4 282 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
TOP3A-210ENST00000580713 EXOC6Q8TAG9 804 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 DYNLL2Q96FJ2 89 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 RIOK1Q9BRS2 568 aaKnown RBP12.93□□□□□ -0.34
TOP3A-210ENST00000580713 ANTXR1Q9H6X2 564 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 CERS4Q9HA82 394 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 TLR7Q9NYK1 1049 aaKnown RBP12.93□□□□□ -0.34
TOP3A-210ENST00000580713 SWAP70Q9UH65 585 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 DBNLQ9UJU6 430 aaKnown RBP12.93□□□□□ -0.34
TOP3A-210ENST00000580713 PPP1R9AQ9ULJ8 1098 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 ADAMTS5Q9UNA0 930 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 COG5Q9UP83 839 aa12.93□□□□□ -0.34
TOP3A-210ENST00000580713 UMODL1Q5DID0 1318 aa12.92□□□□□ -0.34
TOP3A-210ENST00000580713 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-210ENST00000580713 GPR37L1O60883 481 aa12.92□□□□□ -0.34
TOP3A-210ENST00000580713 CD4P01730 458 aa12.92□□□□□ -0.34
TOP3A-210ENST00000580713 RLBP1P12271 317 aa12.92□□□□□ -0.34
TOP3A-210ENST00000580713 ATP2A2P16615 1042 aaKnown RBP12.92□□□□□ -0.34
TOP3A-210ENST00000580713 GJA9P57773 515 aa12.92□□□□□ -0.34
TOP3A-210ENST00000580713 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
TOP3A-210ENST00000580713 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-210ENST00000580713 ZNF214Q9UL59 606 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-210ENST00000580713 CTDP1Q9Y5B0 961 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-210ENST00000580713 MTCH2Q9Y6C9 303 aa12.92□□□□□ -0.34
TOP3A-210ENST00000580713 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
TOP3A-210ENST00000580713 PRRC2BQ5JSZ5 2229 aaKnown RBP12.92□□□□□ -0.34
TOP3A-210ENST00000580713 CHD7Q9P2D1 2997 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 TLL1O43897 1013 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 BEX3Q00994 111 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 TMEM67Q5HYA8 995 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 FAM83BQ5T0W9 1011 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-210ENST00000580713 SNRNP48Q6IEG0 339 aaKnown RBP12.91□□□□□ -0.34
TOP3A-210ENST00000580713 TMED8Q6PL24 325 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-210ENST00000580713 MAMDC4Q6UXC1 1216 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 SDR42E1Q8WUS8 393 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 HLA-CQ95604 372 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 UPF3AQ9H1J1 476 aaKnown RBP12.91□□□□□ -0.34
TOP3A-210ENST00000580713 ABHD16BQ9H3Z7 469 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 GOPCQ9HD26 462 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
TOP3A-210ENST00000580713 ADCY6O43306 1168 aa12.9□□□□□ -0.34
TOP3A-210ENST00000580713 EEF2P13639 858 aaKnown RBP12.9□□□□□ -0.34
TOP3A-210ENST00000580713 KRT40Q6A162 431 aa12.9□□□□□ -0.34
TOP3A-210ENST00000580713 CXCL17Q6UXB2 119 aa12.9□□□□□ -0.34
TOP3A-210ENST00000580713 CPXCR1Q8N123 301 aa12.9□□□□□ -0.34
TOP3A-210ENST00000580713 TMEM57Q8N5G2 664 aa12.9□□□□□ -0.34
TOP3A-210ENST00000580713 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
TOP3A-210ENST00000580713 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
TOP3A-210ENST00000580713 DCP1AQ9NPI6 582 aaPredicted RBP12.9□□□□□ -0.34
TOP3A-210ENST00000580713 GBF1Q92538 1859 aa12.9□□□□□ -0.34
TOP3A-210ENST00000580713 SMIM22K7EJ46 135 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 CA3P07451 260 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 ITGA7Q13683 1181 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 SLC9C2Q5TAH2 1124 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 ITPRIPQ8IWB1 547 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 ANKRD35Q8N283 1001 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 REPS2Q8NFH8 660 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 ARNTL2Q8WYA1 636 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 EAF2Q96CJ1 260 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-210ENST00000580713 SCLYQ96I15 445 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 UIMC1Q96RL1 719 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
TOP3A-210ENST00000580713 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 C11orf16Q9NQ32 467 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-210ENST00000580713 RIPK3Q9Y572 518 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
TOP3A-210ENST00000580713 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-210ENST00000580713 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 STK25O00506 426 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 CABYRO75952 493 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 PDE6AP16499 860 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 POU3F3P20264 500 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-210ENST00000580713 CDK8P49336 464 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 TNFAIP2Q03169 654 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 ARMCX2Q7L311 632 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 AMOTL1Q8IY63 956 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 LCORLQ8N3X6 602 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 SLC43A3Q8NBI5 491 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
TOP3A-210ENST00000580713 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms