RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 ZMYND10O75800 440 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 YEATS4O95619 227 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 CALML3P27482 149 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 ECE1P42892 770 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 NASPP49321 788 aaPredicted RBP9.18□□□□□ -0.94
KPNB1-210ENST00000580573 CSPP1Q1MSJ5 1256 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 KLHL40Q2TBA0 621 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 SKOR2Q2VWA4 1001 aaPredicted RBP9.18□□□□□ -0.94
KPNB1-210ENST00000580573 SUPT20HL1Q3ZLR7 823 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 KIAA1755Q5JYT7 1200 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 FAM173BQ6P4H8 233 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 DIS3L2Q8IYB7 885 aaKnown RBP9.18□□□□□ -0.94
KPNB1-210ENST00000580573 ADGRF4Q8IZF3 695 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 CCDC148Q8NFR7 591 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 LEO1Q8WVC0 666 aaPredicted RBP9.18□□□□□ -0.94
KPNB1-210ENST00000580573 RRP36Q96EU6 259 aaKnown RBP9.18□□□□□ -0.94
KPNB1-210ENST00000580573 C12orf42Q96LP6 360 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 USP28Q96RU2 1077 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 GOPCQ9HD26 462 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 RTEL1Q9NZ71 1219 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 VPS54Q9P1Q0 977 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 RCOR1Q9UKL0 485 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 CFAP45Q9UL16 551 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 KCNJ14Q9UNX9 436 aa9.18□□□□□ -0.94
KPNB1-210ENST00000580573 FRMPD2Q68DX3 1309 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 PNMA6FA0A0J9YX94 578 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 hCG_1642624A0A1W2PR95 340 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 BTBD18B2RXH4 712 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 ZBTB5O15062 677 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 PPP1R11O60927 126 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 USP2O75604 605 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 BMP3P12645 472 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 INPP5BP32019 993 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 KRT2P35908 639 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 SLC1A4P43007 532 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 TOB1P50616 345 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 SAFBQ15424 915 aaKnown RBP eCLIP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 TTBK2Q6IQ55 1244 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 PNMA8AQ86V59 439 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 SULF1Q8IWU6 871 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 LPAR1Q92633 364 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 DCPSQ96C86 337 aaKnown RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 ZNF396Q96N95 335 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 PIGSQ96S52 555 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 ANP32EQ9BTT0 268 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 GLIS2Q9BZE0 524 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 CPVLQ9H3G5 476 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.17□□□□□ -0.94
KPNB1-210ENST00000580573 PCDHA4Q9UN74 947 aa9.17□□□□□ -0.94
KPNB1-210ENST00000580573 GRXCR2A6NFK2 248 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 ADM5C9JUS6 153 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 WDR46O15213 610 aaKnown RBP9.16□□□□□ -0.94
KPNB1-210ENST00000580573 TRAK2O60296 914 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 MBD3O95983 291 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 PTPRAP18433 802 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 TRAPPC10P48553 1259 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 FOSBP53539 338 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 UBE2HP62256 183 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 ATP2B2Q01814 1243 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 NR5A1Q13285 461 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 PTPAQ15257 358 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 RILPL1Q5EBL4 403 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.16□□□□□ -0.94
KPNB1-210ENST00000580573 KCTD1Q719H9 257 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 KRT26Q7Z3Y9 468 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 GPT2Q8TD30 523 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 CCDC12Q8WUD4 166 aaPredicted RBP9.16□□□□□ -0.94
KPNB1-210ENST00000580573 GPKOWQ92917 476 aaPredicted RBP eCLIP9.16□□□□□ -0.94
KPNB1-210ENST00000580573 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 UBA5Q9GZZ9 404 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
KPNB1-210ENST00000580573 SNCAIPQ9Y6H5 919 aa9.16□□□□□ -0.94
KPNB1-210ENST00000580573 UNCXA6NJT0 531 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 USP17L10C9JJH3 530 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 ADAMTS3O15072 1205 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 FIBPO43427 364 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 EVI5O60447 810 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 PRPF40AO75400 957 aaKnown RBP9.15□□□□□ -0.94
KPNB1-210ENST00000580573 CLK2P49760 499 aaKnown RBP9.15□□□□□ -0.94
KPNB1-210ENST00000580573 STAT2P52630 851 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 USP14P54578 494 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 BACE1P56817 501 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 SLC39A14Q15043 492 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 CCDC96Q2M329 555 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 SH3D19Q5HYK7 790 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 EARS2Q5JPH6 523 aaKnown RBP9.15□□□□□ -0.94
KPNB1-210ENST00000580573 SYDE2Q5VT97 1194 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 PRAMEF18Q5VWM3 479 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 ANO1Q5XXA6 986 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 FAM160B2Q86V87 743 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 BLIDQ8IZY5 108 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 CDCA5Q96FF9 252 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 PGBD1Q96JS3 809 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 NUP88Q99567 741 aaPredicted RBP9.15□□□□□ -0.94
KPNB1-210ENST00000580573 FTOQ9C0B1 505 aaKnown RBP eCLIP9.15□□□□□ -0.94
KPNB1-210ENST00000580573 RANBP17Q9H2T7 1088 aaKnown RBP9.15□□□□□ -0.94
KPNB1-210ENST00000580573 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
KPNB1-210ENST00000580573 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms