RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	WDFY4	Q6ZS81	3184 aa		7.5	□□□□□ -1.21
KPNB1-209	ENST00000580158	BRWD1	Q9NSI6	2320 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	USP17L10	C9JJH3	530 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158		H3BM21	787 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	RFXAP	O00287	272 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	ZMYND10	O75800	440 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	RABGGTB	P53611	331 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	GRB14	Q14449	540 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	FAM47A	Q5JRC9	791 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	SH3BP5L	Q7L8J4	393 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	LINS1	Q8NG48	757 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	WDR18	Q9BV38	432 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	IRF2BPL	Q9H1B7	796 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	SLC4A7	Q9Y6M7	1214 aa		7.49	□□□□□ -1.21
KPNB1-209	ENST00000580158	TLR3	O15455	904 aa	Known RBP	7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	STRN	O43815	780 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	ADH1C	P00326	375 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	IFIT1	P09914	478 aa	Known RBP	7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	SLURP2	P0DP57	97 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	PTPRZ1	P23471	2315 aa	Predicted RBP	7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	GNAI1	P63096	354 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	TRIM26	Q12899	539 aa	Predicted RBP	7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	ARID5B	Q14865	1188 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	PKN1	Q16512	942 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	TMEM67	Q5HYA8	995 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	METTL24	Q5JXM2	366 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	HFE2	Q6ZVN8	426 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	OTOP2	Q7RTS6	562 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	TSEN34	Q9BSV6	310 aa	Known RBP	7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	UPF3B	Q9BZI7	483 aa	Known RBP	7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	PPP1R12C	Q9BZL4	782 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	CERS4	Q9HA82	394 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	TBX21	Q9UL17	535 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	ZNF236	Q9UL36	1845 aa		7.48	□□□□□ -1.21
KPNB1-209	ENST00000580158	SPTBN4	Q9H254	2564 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	FAM196B	A6NMK8	535 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	ZBBX	A8MT70	800 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	PDE8B	O95263	885 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	PGK1	P00558	417 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	ASNS	P08243	561 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	MYOG	P15173	224 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	TIMP2	P16035	220 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	PRDX5	P30044	214 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	ID4	P47928	161 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	CALD1	Q05682	793 aa	Known RBP	7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	AGER	Q15109	404 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	PRAMEF19	Q5SWL8	479 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	KRT40	Q6A162	431 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	RPUSD2	Q8IZ73	545 aa	Known RBP	7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	PRSS33	Q8NF86	280 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	DNAAF4	Q8WXU2	420 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	VTI1A	Q96AJ9	217 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	PURB	Q96QR8	312 aa	Known RBP	7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	PUS3	Q9BZE2	481 aa	Known RBP	7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	CFAP54	Q96N23	3096 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	ZNF536	O15090	1300 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	CLSPN	Q9HAW4	1339 aa		7.47	□□□□□ -1.21
KPNB1-209	ENST00000580158	CACNA1G	O43497	2377 aa		7.46	□□□□□ -1.21
KPNB1-209	ENST00000580158	USP34	Q70CQ2	3546 aa		7.46	□□□□□ -1.21
KPNB1-209	ENST00000580158	KIF28P	B7ZC32	967 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L15	C9J2P7	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L13	C9JLJ4	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L11	C9JVI0	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L18	D6R9N7	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L22	D6RA61	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L17	D6RBQ6	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L19	D6RCP7	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L20	D6RJB6	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	KRT37	O76014	449 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	IGHA2	P01877	340 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	ATP2A2	P16615	1042 aa	Known RBP	7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	ADORA2A	P29274	412 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L24	Q0WX57	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	FKBP5	Q13451	457 aa	Predicted RBP	7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	LEXM	Q3ZCV2	418 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	USP17L2	Q6R6M4	530 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	CCDC146	Q8IYE0	955 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	ZGPAT	Q8N5A5	531 aa	Known RBP	7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	C8orf58	Q8NAV2	365 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	ARNTL2	Q8WYA1	636 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	GLT1D1	Q96MS3	346 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	CDK15	Q96Q40	435 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	UBE2Z	Q9H832	354 aa	Predicted RBP	7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	GNL3L	Q9NVN8	582 aa	Known RBP	7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	IFT57	Q9NWB7	429 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	NRBP1	Q9UHY1	535 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	HERC5	Q9UII4	1024 aa	Known RBP	7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	FAM50B	Q9Y247	325 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	PCDHB15	Q9Y5E8	787 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	GAK	O14976	1311 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	KIF16B	Q96L93	1317 aa		7.46	□□□□□ -1.22
KPNB1-209	ENST00000580158	CHD9	Q3L8U1	2897 aa		7.45	□□□□□ -1.22
KPNB1-209	ENST00000580158	COL4A4	P53420	1690 aa	Predicted RBP	7.45	□□□□□ -1.22
KPNB1-209	ENST00000580158	SPTLC1	O15269	473 aa		7.45	□□□□□ -1.22
KPNB1-209	ENST00000580158	CNMD	O75829	334 aa		7.45	□□□□□ -1.22
KPNB1-209	ENST00000580158	CA3	P07451	260 aa		7.45	□□□□□ -1.22
KPNB1-209	ENST00000580158	ZNF853	P0CG23	659 aa		7.45	□□□□□ -1.22
KPNB1-209	ENST00000580158	IL9	P15248	144 aa		7.45	□□□□□ -1.22
KPNB1-209	ENST00000580158	ACLY	P53396	1101 aa		7.45	□□□□□ -1.22
KPNB1-209	ENST00000580158	DZIP1	Q86YF9	867 aa	Known RBP	7.45	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms