RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TKFCQ3LXA3 575 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 TSHZ3Q63HK5 1081 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 B4GALNT3Q6L9W6 998 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 SH3RF1Q7Z6J0 888 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 STK11IPQ8N1F8 1099 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 CHURC1Q8WUH1 139 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 CEP95Q96GE4 821 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 FSD1Q9BTV5 496 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 ACAD9Q9H845 621 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-214ENST00000580073 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-214ENST00000580073 LCTP09848 1927 aa15.87■□□□□ 0.13
TRAF4-214ENST00000580073 CUL9Q8IWT3 2517 aa15.86■□□□□ 0.13
TRAF4-214ENST00000580073 A0A0U1RQG5 324 aaPredicted RBP15.86■□□□□ 0.13
TRAF4-214ENST00000580073 PATL2C9JE40 543 aaKnown RBP15.86■□□□□ 0.13
TRAF4-214ENST00000580073 BMP3P12645 472 aa15.86■□□□□ 0.13
TRAF4-214ENST00000580073 FOSL2P15408 326 aa15.86■□□□□ 0.13
TRAF4-214ENST00000580073 TAL1P17542 331 aaPredicted RBP15.86■□□□□ 0.13
TRAF4-214ENST00000580073 PPIGQ13427 754 aaKnown RBP eCLIP15.86■□□□□ 0.135e-10■□□□□ 11
TRAF4-214ENST00000580073 ACVR2BQ13705 512 aa15.86■□□□□ 0.13
TRAF4-214ENST00000580073 SLFN13Q68D06 897 aa15.86■□□□□ 0.13
TRAF4-214ENST00000580073 KLHDC9Q8NEP7 349 aa15.86■□□□□ 0.13
TRAF4-214ENST00000580073 NEDD1Q8NHV4 660 aa15.86■□□□□ 0.13
TRAF4-214ENST00000580073 MAFAQ8NHW3 353 aaPredicted RBP15.86■□□□□ 0.13
TRAF4-214ENST00000580073 SEZ6LQ9BYH1 1024 aa15.86■□□□□ 0.13
TRAF4-214ENST00000580073 EPB41L4AQ9HCS5 686 aaPredicted RBP15.86■□□□□ 0.13
TRAF4-214ENST00000580073 LAMA2P24043 3122 aaKnown RBP15.85■□□□□ 0.13
TRAF4-214ENST00000580073 ASB14A6NK59 587 aa15.85■□□□□ 0.13
TRAF4-214ENST00000580073 NUCB1Q02818 461 aa15.85■□□□□ 0.13
TRAF4-214ENST00000580073 ARMCX2Q7L311 632 aa15.85■□□□□ 0.13
TRAF4-214ENST00000580073 IFNL3Q8IZI9 196 aa15.85■□□□□ 0.13
TRAF4-214ENST00000580073 LRRC47Q8N1G4 583 aaKnown RBP15.85■□□□□ 0.13
TRAF4-214ENST00000580073 GMCL1Q96IK5 515 aa15.85■□□□□ 0.13
TRAF4-214ENST00000580073 CDX2Q99626 313 aaPredicted RBP15.85■□□□□ 0.13
TRAF4-214ENST00000580073 UPF3AQ9H1J1 476 aaKnown RBP15.85■□□□□ 0.13
TRAF4-214ENST00000580073 MTIF3Q9H2K0 278 aaKnown RBP15.85■□□□□ 0.13
TRAF4-214ENST00000580073 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
TRAF4-214ENST00000580073 RAVER2Q9HCJ3 691 aaKnown RBP15.85■□□□□ 0.13
TRAF4-214ENST00000580073 MYH6P13533 1939 aa15.85■□□□□ 0.13
TRAF4-214ENST00000580073 UNC80Q8N2C7 3258 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 M0R2C6 588 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 PRDM1O75626 825 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 SNAI1O95863 264 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-214ENST00000580073 TIMP1P01033 207 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 SLC1A4P43007 532 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 GJA9P57773 515 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 KCNA10Q16322 511 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 CCDC144BQ3MJ40 725 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 TMEM199Q8N511 208 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 VTI1AQ96AJ9 217 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 LENG1Q96BZ8 264 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-214ENST00000580073 LNPKQ9C0E8 428 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 RIPK3Q9Y572 518 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
TRAF4-214ENST00000580073 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-214ENST00000580073 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-214ENST00000580073 TSPY2A6NKD2 308 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 ZEB2O60315 1214 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 CABYRO75952 493 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 ASGR1P07306 291 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 PDE4AP27815 886 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 PPARAQ07869 468 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 FAAP100Q0VG06 881 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 PSRC1Q6PGN9 363 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-214ENST00000580073 HOMER2Q9NSB8 354 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 RNF146Q9NTX7 359 aa15.83■□□□□ 0.12
TRAF4-214ENST00000580073 TMEM232C9JQI7 657 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 PLA2G6O60733 806 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 TFAP4Q01664 338 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 GNASQ5JWF2 1037 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 CCSAPQ6IQ19 270 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-214ENST00000580073 MFSD5Q6N075 450 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 CHD1LQ86WJ1 897 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 PI4K2BQ8TCG2 481 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 STAG1Q8WVM7 1258 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 COL25A1Q9BXS0 654 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-214ENST00000580073 TBX21Q9UL17 535 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 TANC1Q9C0D5 1861 aa15.82■□□□□ 0.12
TRAF4-214ENST00000580073 ARVCFO00192 962 aa15.81■□□□□ 0.12
TRAF4-214ENST00000580073 MX1P20591 662 aa15.81■□□□□ 0.12
TRAF4-214ENST00000580073 DNAJB2P25686 324 aa15.81■□□□□ 0.12
TRAF4-214ENST00000580073 NOL8Q76FK4 1167 aaKnown RBP15.81■□□□□ 0.12
TRAF4-214ENST00000580073 SKAP1Q86WV1 359 aa15.81■□□□□ 0.12
TRAF4-214ENST00000580073 CCDC144CPQ8IYA2 1237 aa15.81■□□□□ 0.12
TRAF4-214ENST00000580073 MYLIPQ8WY64 445 aa15.81■□□□□ 0.12
TRAF4-214ENST00000580073 SYMPKQ92797 1274 aaKnown RBP15.81■□□□□ 0.12
TRAF4-214ENST00000580073 PNMA2Q9UL42 364 aa15.81■□□□□ 0.12
TRAF4-214ENST00000580073 STX8Q9UNK0 236 aa15.81■□□□□ 0.12
TRAF4-214ENST00000580073 LOC102724159A0A0B4J2E5 919 aa15.8■□□□□ 0.12
TRAF4-214ENST00000580073 ITGB8P26012 769 aa15.8■□□□□ 0.12
TRAF4-214ENST00000580073 NKX3-2P78367 333 aa15.8■□□□□ 0.12
TRAF4-214ENST00000580073 TNFAIP2Q03169 654 aa15.8■□□□□ 0.12
TRAF4-214ENST00000580073 PWP2Q15269 919 aaKnown RBP15.8■□□□□ 0.12
TRAF4-214ENST00000580073 ZMYM1Q5SVZ6 1142 aa15.8■□□□□ 0.12
TRAF4-214ENST00000580073 TLK2Q86UE8 772 aa15.8■□□□□ 0.12
TRAF4-214ENST00000580073 FAM133AQ8N9E0 248 aa15.8■□□□□ 0.12
TRAF4-214ENST00000580073 MPHOSPH6Q99547 160 aaKnown RBP15.8■□□□□ 0.12
TRAF4-214ENST00000580073 AP5M1Q9H0R1 490 aa15.8■□□□□ 0.12
TRAF4-214ENST00000580073 TTYH1Q9H313 450 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms