RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 WAPLQ7Z5K2 1190 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 ZNF354CQ86Y25 554 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 CCNJLQ8IV13 435 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 ZNF654Q8IZM8 581 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 FLCNQ8NFG4 579 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 SERINC2Q96SA4 455 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 CSRNP2Q9H175 543 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 CCDC87Q9NVE4 849 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 COMMD8Q9NX08 183 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 CGNQ9P2M7 1197 aaKnown RBP7.66□□□□□ -1.18
COPS3-216ENST00000579716 TAGLN3Q9UI15 199 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 XPO7Q9UIA9 1087 aaKnown RBP7.66□□□□□ -1.18
COPS3-216ENST00000579716 U3KQE9 123 aa7.66□□□□□ -1.18
COPS3-216ENST00000579716 A0A096LPE4 126 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 A0A1W2PP55 124 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 A0A1W2PPZ6 126 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 GOLGA6L3A6NEY3 463 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 TMEM110-MUSTN1A8MSY1 372 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 VGLL3A8MV65 326 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 ICMTO60725 284 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 FGRP09769 529 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 IFIT2P09913 472 aaKnown RBP7.65□□□□□ -1.18
COPS3-216ENST00000579716 IDEP14735 1019 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 PCSK2P16519 638 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 HOXC13P31276 330 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 ABCD1P33897 745 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 GPSM2P81274 684 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 ZBED6P86452 979 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 DDB1Q16531 1140 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 ANKRD45Q5TZF3 282 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 ANO1Q5XXA6 986 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 CFAP161Q6P656 301 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 SLC4A10Q6U841 1118 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 SPICE1Q8N0Z3 855 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 ANKRD42Q8N9B4 389 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 SNX29Q8TEQ0 813 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 N4BP2L2Q92802 583 aaPredicted RBP7.65□□□□□ -1.18
COPS3-216ENST00000579716 PGBD4Q96DM1 585 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 PDCL3Q9H2J4 239 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 LRRC4CQ9HCJ2 640 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 LUZP4Q9P127 313 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.65□□□□□ -1.18
COPS3-216ENST00000579716 RABL2BQ9UNT1 228 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 CEP83Q9Y592 693 aa7.65□□□□□ -1.18
COPS3-216ENST00000579716 DCAF1Q9Y4B6 1507 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 SH3BGRP55822 239 aaPredicted RBP7.64□□□□□ -1.19
COPS3-216ENST00000579716 PCDH1Q08174 1060 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 TTF1Q15361 905 aaPredicted RBP7.64□□□□□ -1.19
COPS3-216ENST00000579716 ZNF648Q5T619 568 aaPredicted RBP7.64□□□□□ -1.19
COPS3-216ENST00000579716 JAKMIP3Q5VZ66 844 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 MMS22LQ6ZRQ5 1243 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 C14orf80Q86SX3 495 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 RASSF3Q86WH2 238 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 GJD3Q8N144 294 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 SMCR8Q8TEV9 937 aaPredicted RBP7.64□□□□□ -1.19
COPS3-216ENST00000579716 ZFPM2Q8WW38 1151 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 TBC1D20Q96BZ9 403 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 TRIM6Q9C030 488 aaPredicted RBP7.64□□□□□ -1.19
COPS3-216ENST00000579716 CHCHD3Q9NX63 227 aaKnown RBP7.64□□□□□ -1.19
COPS3-216ENST00000579716 DCAF16Q9NXF7 216 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 SIRPGQ9P1W8 387 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 VTI1BQ9UEU0 232 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 USP25Q9UHP3 1055 aa7.64□□□□□ -1.19
COPS3-216ENST00000579716 CPLX1O14810 134 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 KIF20AO95235 890 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 P4HBP07237 508 aaKnown RBP7.63□□□□□ -1.19
COPS3-216ENST00000579716 SETSIPP0DME0 302 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 RAB6AP20340 208 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 SNX16P57768 344 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 BNIP3Q12983 259 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 SMC1AQ14683 1233 aaKnown RBP7.63□□□□□ -1.19
COPS3-216ENST00000579716 FAM83BQ5T0W9 1011 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 ALKBH2Q6NS38 261 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 ERAP2Q6P179 960 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 OGFOD3Q6PK18 319 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 SNX32Q86XE0 403 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 KIAA0825Q8IV33 1275 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 APPL2Q8NEU8 664 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 SPAG5Q96R06 1193 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 SH3GLB2Q9NR46 395 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 STK26Q9P289 416 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 SEL1LQ9UBV2 794 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 PPP1R9AQ9ULJ8 1098 aa7.63□□□□□ -1.19
COPS3-216ENST00000579716 BAIAP3O94812 1187 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 NCAM1P13591 858 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 SARSP49591 514 aaKnown RBP7.62□□□□□ -1.19
COPS3-216ENST00000579716 PARP10Q53GL7 1025 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 MFSD4BQ5TF39 518 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 CTR9Q6PD62 1173 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 TMC4Q7Z404 712 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 KIAA0907Q7Z7F0 614 aaPredicted RBP7.62□□□□□ -1.19
COPS3-216ENST00000579716 HOMER1Q86YM7 354 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 FAM43AQ8N2R8 423 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 TEX9Q8N6V9 391 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 ENAHQ8N8S7 591 aaPredicted RBP7.62□□□□□ -1.19
COPS3-216ENST00000579716 AGBL5Q8NDL9 886 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 FAM161BQ96MY7 647 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 SCLT1Q96NL6 688 aa7.62□□□□□ -1.19
COPS3-216ENST00000579716 HERPUD2Q9BSE4 406 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms