RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 MOGSQ13724 837 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 TREML2Q5T2D2 321 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 SPRYD7Q5W111 196 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 TYW1BQ6NUM6 668 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 FERMT3Q86UX7 667 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
TSEN54-206ENST00000579449 TNPO1Q92973 898 aaKnown RBP15.98■□□□□ 0.15
TSEN54-206ENST00000579449 RANBP17Q9H2T7 1088 aaKnown RBP15.98■□□□□ 0.15
TSEN54-206ENST00000579449 MYH15Q9Y2K3 1946 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 DSG3P32926 999 aa15.97■□□□□ 0.15
TSEN54-206ENST00000579449 CCDC174Q6PII3 467 aa15.97■□□□□ 0.15
TSEN54-206ENST00000579449 FASTKD5Q7L8L6 764 aaKnown RBP15.97■□□□□ 0.15
TSEN54-206ENST00000579449 SAPCD2Q86UD0 394 aa15.97■□□□□ 0.15
TSEN54-206ENST00000579449 FBXO11Q86XK2 927 aa15.97■□□□□ 0.15
TSEN54-206ENST00000579449 CCDC148Q8NFR7 591 aa15.97■□□□□ 0.15
TSEN54-206ENST00000579449 TLL2Q9Y6L7 1015 aa15.97■□□□□ 0.15
TSEN54-206ENST00000579449 KIF28PB7ZC32 967 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 HOXA7P31268 230 aaPredicted RBP15.96■□□□□ 0.15
TSEN54-206ENST00000579449 ZNF157P51786 506 aaPredicted RBP15.96■□□□□ 0.15
TSEN54-206ENST00000579449 GTF2A2P52657 109 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 KIF23Q02241 960 aaPredicted RBP15.96■□□□□ 0.15
TSEN54-206ENST00000579449 COG2Q14746 738 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 SAFBQ15424 915 aaKnown RBP eCLIP15.96■□□□□ 0.15
TSEN54-206ENST00000579449 NPY5RQ15761 445 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 RASAL3Q86YV0 1011 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 DIS3L2Q8IYB7 885 aaKnown RBP15.96■□□□□ 0.15
TSEN54-206ENST00000579449 FAM177A1Q8N128 213 aaPredicted RBP15.96■□□□□ 0.15
TSEN54-206ENST00000579449 CCDC12Q8WUD4 166 aaPredicted RBP15.96■□□□□ 0.15
TSEN54-206ENST00000579449 ATG4CQ96DT6 458 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 MS4A4AQ96JQ5 239 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 AMNQ9BXJ7 453 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 ZSCAN16Q9H4T2 348 aaPredicted RBP15.96■□□□□ 0.15
TSEN54-206ENST00000579449 AGTPBP1Q9UPW5 1226 aa15.96■□□□□ 0.15
TSEN54-206ENST00000579449 TMEM88BA6NKF7 163 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 BTBD18B2RXH4 712 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 ZBED4O75132 1171 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 ZBTB48P10074 688 aaPredicted RBP15.95■□□□□ 0.14
TSEN54-206ENST00000579449 FDX1P10109 184 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 CETPP11597 493 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 CALML3P27482 149 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 KRT2P35908 639 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 FOXD4L6Q3SYB3 417 aaPredicted RBP15.95■□□□□ 0.14
TSEN54-206ENST00000579449 USH1GQ495M9 461 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 GPAT2Q6NUI2 795 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 RGMBQ6NW40 437 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 PPP1R18Q6NYC8 613 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 FOXD4L3Q6VB84 417 aaPredicted RBP15.95■□□□□ 0.14
TSEN54-206ENST00000579449 OXER1Q8TDS5 423 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 ZMYND12Q9H0C1 365 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 SLC38A10Q9HBR0 1119 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 CTDP1Q9Y5B0 961 aaPredicted RBP15.95■□□□□ 0.14
TSEN54-206ENST00000579449 PCDHA1Q9Y5I3 950 aa15.95■□□□□ 0.14
TSEN54-206ENST00000579449 MYPNQ86TC9 1320 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 CCL15-CCL14A0A0B4J2E2 113 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 ESYT2A0FGR8 921 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 SMCO2A6NFE2 343 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 SPDYE16A6NNV3 312 aaPredicted RBP15.94■□□□□ 0.14
TSEN54-206ENST00000579449 VWA5AO00534 786 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 ADAMTS3O15072 1205 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 TAL1P17542 331 aaPredicted RBP15.94■□□□□ 0.14
TSEN54-206ENST00000579449 U2AF2P26368 475 aaKnown RBP eCLIP15.94■□□□□ 0.14
TSEN54-206ENST00000579449 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
TSEN54-206ENST00000579449 CCL15Q16663 113 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 GALNT17Q6IS24 598 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 BLIDQ8IZY5 108 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 DAGLBQ8NCG7 672 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 FOXP1Q9H334 677 aaPredicted RBP15.94■□□□□ 0.14
TSEN54-206ENST00000579449 BRMS1Q9HCU9 246 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 HOXC10Q9NYD6 342 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 ABT1Q9ULW3 272 aaKnown RBP15.94■□□□□ 0.14
TSEN54-206ENST00000579449 PCDHA4Q9UN74 947 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 ADAMTS5Q9UNA0 930 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 ZNF536O15090 1300 aa15.94■□□□□ 0.14
TSEN54-206ENST00000579449 ICAM1P05362 532 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 IRX3P78415 501 aaPredicted RBP15.93■□□□□ 0.14
TSEN54-206ENST00000579449 TRAF1Q13077 416 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 NR5A1Q13285 461 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 PABPC4Q13310 644 aaKnown RBP eCLIP15.93■□□□□ 0.14
TSEN54-206ENST00000579449 FAM173BQ6P4H8 233 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 REPS2Q8NFH8 660 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 BRI3BPQ8WY22 251 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 CHAMP1Q96JM3 812 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 ASCC2Q9H1I8 757 aaPredicted RBP15.93■□□□□ 0.14
TSEN54-206ENST00000579449 RAVER2Q9HCJ3 691 aaKnown RBP15.93■□□□□ 0.14
TSEN54-206ENST00000579449 C6orf50Q9HD87 102 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 ATP6V1DQ9Y5K8 247 aa15.93■□□□□ 0.14
TSEN54-206ENST00000579449 SLC10A3P09131 477 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 OSBPP22059 807 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 GNA11P29992 359 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 ADCY7P51828 1080 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 BRAPQ7Z569 592 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 CPXCR1Q8N123 301 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 AGBL1Q96MI9 1066 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 P2RX7Q99572 595 aaKnown RBP15.92■□□□□ 0.14
TSEN54-206ENST00000579449 RIC8AQ9NPQ8 531 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 CCPG1Q9ULG6 757 aa15.92■□□□□ 0.14
TSEN54-206ENST00000579449 A0A0G2JMZ2 1700 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 BTBD19C9JJ37 291 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 M0R2N6 131 aa15.91■□□□□ 0.14
TSEN54-206ENST00000579449 BAG4O95429 457 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms