RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 GUCD1Q96NT3 240 aa10.61□□□□□ -0.71
GGA3-207ENST00000578896 PURBQ96QR8 312 aaKnown RBP10.61□□□□□ -0.71
GGA3-207ENST00000578896 IL17RBQ9NRM6 502 aa10.61□□□□□ -0.71
GGA3-207ENST00000578896 NRBP1Q9UHY1 535 aa10.61□□□□□ -0.71
GGA3-207ENST00000578896 FAM184BQ9ULE4 1060 aa10.61□□□□□ -0.71
GGA3-207ENST00000578896 STX8Q9UNK0 236 aa10.61□□□□□ -0.71
GGA3-207ENST00000578896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.61□□□□□ -0.71
GGA3-207ENST00000578896 ZNF536O15090 1300 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 TSPY2A6NKD2 308 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 ATP2A1O14983 1001 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 SLC3A2P08195 630 aaKnown RBP10.6□□□□□ -0.71
GGA3-207ENST00000578896 CLTBP09497 229 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 C6orf222P0C671 652 aaPredicted RBP10.6□□□□□ -0.71
GGA3-207ENST00000578896 ALAS1P13196 640 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 SLC1A4P43007 532 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 ACLYP53396 1101 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 BEX3Q00994 111 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 CCDC144BQ3MJ40 725 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
GGA3-207ENST00000578896 TTBK2Q6IQ55 1244 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 MAMDC4Q6UXC1 1216 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 ARMCX2Q7L311 632 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 CCDC144CPQ8IYA2 1237 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 KLHDC9Q8NEP7 349 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 STAG1Q8WVM7 1258 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 YTHDC1Q96MU7 727 aaKnown RBP10.6□□□□□ -0.71
GGA3-207ENST00000578896 STARD7Q9NQZ5 370 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 TOMM22Q9NS69 142 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 RNF146Q9NTX7 359 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 TMEM39AQ9NV64 488 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
GGA3-207ENST00000578896 STXBP5LQ9Y2K9 1186 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 PLIN4Q96Q06 1357 aa10.6□□□□□ -0.71
GGA3-207ENST00000578896 SYNGAP1Q96PV0 1343 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 VCANP13611 3396 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 A0A0D9SFI3 127 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
GGA3-207ENST00000578896 SOWAHBA6NEL2 793 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 RAG1P15918 1043 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 SLC16A2P36021 539 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 STAT2P52630 851 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 PDE1AP54750 535 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 HAND2P61296 217 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 FAAP100Q0VG06 881 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 MUM1L1Q5H9M0 696 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 TMEM63BQ5T3F8 832 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 C1orf53Q5VUE5 145 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 CCSAPQ6IQ19 270 aaPredicted RBP10.59□□□□□ -0.71
GGA3-207ENST00000578896 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 EEPD1Q7L9B9 569 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 CHST13Q8NET6 341 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 TRERF1Q96PN7 1200 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 LNPKQ9C0E8 428 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 KATNBL1Q9H079 304 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 ACAD9Q9H845 621 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 A1CFQ9NQ94 594 aaKnown RBP10.59□□□□□ -0.71
GGA3-207ENST00000578896 PRR12Q9ULL5 1215 aa10.59□□□□□ -0.71
GGA3-207ENST00000578896 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.71
GGA3-207ENST00000578896 KIAA0355O15063 1070 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 DUSP11O75319 330 aaKnown RBP10.58□□□□□ -0.72
GGA3-207ENST00000578896 FGAP02671 866 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 ASGR1P07306 291 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 NMIQ13287 307 aaPredicted RBP10.58□□□□□ -0.72
GGA3-207ENST00000578896 CCDC96Q2M329 555 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 GNASQ5JWF2 1037 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 ZNF697Q5TEC3 545 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 RCSD1Q6JBY9 416 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
GGA3-207ENST00000578896 ZNF467Q7Z7K2 595 aaPredicted RBP10.58□□□□□ -0.72
GGA3-207ENST00000578896 ZNF589Q86UQ0 364 aaPredicted RBP10.58□□□□□ -0.72
GGA3-207ENST00000578896 FAM160B2Q86V87 743 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 MSL3Q8N5Y2 521 aaKnown RBP10.58□□□□□ -0.72
GGA3-207ENST00000578896 FAM133AQ8N9E0 248 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 CHURC1Q8WUH1 139 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 EVI5LQ96CN4 794 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 GMCL1Q96IK5 515 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 TSEN34Q9BSV6 310 aaKnown RBP10.58□□□□□ -0.72
GGA3-207ENST00000578896 SEMA6BQ9H3T3 888 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 ABHD16BQ9H3Z7 469 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 GPCPD1Q9NPB8 672 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 PDGFCQ9NRA1 345 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 FBXO40Q9UH90 709 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 TTC28Q96AY4 2481 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 ASTN1O14525 1302 aa10.58□□□□□ -0.72
GGA3-207ENST00000578896 LCTP09848 1927 aa10.57□□□□□ -0.72
GGA3-207ENST00000578896 CTAGE5O15320 804 aa10.57□□□□□ -0.72
GGA3-207ENST00000578896 OAZ1P54368 228 aa10.57□□□□□ -0.72
GGA3-207ENST00000578896 NSMFQ6X4W1 530 aa10.57□□□□□ -0.72
GGA3-207ENST00000578896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.57□□□□□ -0.72
GGA3-207ENST00000578896 RILPL2Q969X0 211 aa10.57□□□□□ -0.72
GGA3-207ENST00000578896 RNPC3Q96LT9 517 aaKnown RBP10.57□□□□□ -0.72
GGA3-207ENST00000578896 CDX2Q99626 313 aaPredicted RBP10.57□□□□□ -0.72
GGA3-207ENST00000578896 PPP1R12CQ9BZL4 782 aa10.57□□□□□ -0.72
GGA3-207ENST00000578896 TTYH1Q9H313 450 aaPredicted RBP10.57□□□□□ -0.72
GGA3-207ENST00000578896 HELLSQ9NRZ9 838 aa10.57□□□□□ -0.72
GGA3-207ENST00000578896 SYNPO2Q9UMS6 1093 aa10.57□□□□□ -0.72
GGA3-207ENST00000578896 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
GGA3-207ENST00000578896 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms