RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
RTTN-202ENST00000578780 GBP6Q6ZN66 633 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 CKAP2LQ8IYA6 745 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 NEDD1Q8NHV4 660 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 PSMD1Q99460 953 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 OSBPL5Q9H0X9 879 aaPredicted RBP11.34□□□□□ -0.59
RTTN-202ENST00000578780 KCNJ14Q9UNX9 436 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
RTTN-202ENST00000578780 ADAMTSL1Q8N6G6 1762 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 SCN9AQ15858 1988 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 hCG_1642624A0A1W2PR95 340 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 MMP1P03956 469 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 KIF5BP33176 963 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 TGFB2P61812 414 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 NFIAQ12857 509 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 LARGE2Q8N3Y3 721 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 SRBD1Q8N5C6 995 aaKnown RBP11.33□□□□□ -0.6
RTTN-202ENST00000578780 MRFAP1L1Q96HT8 127 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
RTTN-202ENST00000578780 CARD6Q9BX69 1037 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 ZNF277Q9NRM2 450 aaPredicted RBP11.33□□□□□ -0.6
RTTN-202ENST00000578780 MCM8Q9UJA3 840 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 ECM29Q5VYK3 1845 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 MYH1P12882 1939 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 MYH15Q9Y2K3 1946 aa11.33□□□□□ -0.6
RTTN-202ENST00000578780 PPFIA4O75335 1185 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 ME1P48163 572 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 LIG3P49916 1009 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 CACNB3P54284 484 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 GABPAQ06546 454 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 STK38Q15208 465 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 PKN1Q16512 942 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 NUP62CLQ9H1M0 184 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 PDE11AQ9HCR9 933 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 PIM2Q9P1W9 311 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 RPS6KL1Q9Y6S9 549 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 FOCADQ5VW36 1801 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 BTBD18B2RXH4 712 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 HLA-DOAP06340 250 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 XBP1P17861 261 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 ERCC3P19447 782 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 USP8P40818 1118 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 ZNF165P49910 485 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 SF3A1Q15459 793 aaKnown RBP11.32□□□□□ -0.6
RTTN-202ENST00000578780 SARM1Q6SZW1 724 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 DIS3L2Q8IYB7 885 aaKnown RBP11.32□□□□□ -0.6
RTTN-202ENST00000578780 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
RTTN-202ENST00000578780 LINC00301Q8NCQ3 95 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 ZNF526Q8TF50 670 aaPredicted RBP11.32□□□□□ -0.6
RTTN-202ENST00000578780 MAP3K14Q99558 947 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 SERPINB13Q9UIV8 391 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 MTMR7Q9Y216 660 aa11.32□□□□□ -0.6
RTTN-202ENST00000578780 CNTNAP5Q8WYK1 1306 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 FANCGO15287 622 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 N4BP1O75113 896 aaKnown RBP11.31□□□□□ -0.6
RTTN-202ENST00000578780 RAD17O75943 681 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 YEATS4O95619 227 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 TCP10Q12799 353 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 R3HDM1Q15032 1099 aaKnown RBP11.31□□□□□ -0.6
RTTN-202ENST00000578780 LONRF2Q1L5Z9 754 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 JAKMIP3Q5VZ66 844 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 ANO1Q5XXA6 986 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 ZFPM1Q8IX07 1006 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 PARD6BQ9BYG5 372 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 VPS54Q9P1Q0 977 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 PPP1R1BQ9UD71 204 aaPredicted RBP11.31□□□□□ -0.6
RTTN-202ENST00000578780 FAN1Q9Y2M0 1017 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 NR1I2O75469 434 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 GCFC2P16383 781 aaKnown RBP11.31□□□□□ -0.6
RTTN-202ENST00000578780 GRIK3Q13003 919 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 GRM4Q14833 912 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 SOGA3Q5TF21 947 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 NOSTRINQ8IVI9 506 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 CCAR1Q8IX12 1150 aaKnown RBP11.31□□□□□ -0.6
RTTN-202ENST00000578780 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
RTTN-202ENST00000578780 KCNG4Q8TDN1 519 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 DNAJC25Q9H1X3 360 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 VEZTQ9HBM0 779 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 SWAP70Q9UH65 585 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 PCDHA7Q9UN72 937 aa11.31□□□□□ -0.6
RTTN-202ENST00000578780 SPTLC2O15270 562 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 TUBB4AP04350 444 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 GNAQP50148 359 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 ETF1P62495 437 aaKnown RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 ADCY2Q08462 1091 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 NEDD9Q14511 834 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 CFAP100Q494V2 611 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 RSBN1LQ6PCB5 846 aaPredicted RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 SHISA4Q96DD7 197 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 FOXP1Q9H334 677 aaPredicted RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 DDX19AQ9NUU7 478 aaKnown RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 ETAA1Q9NY74 926 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms