RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ALDH1L2Q3SY69 923 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SPRED2Q7Z698 418 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ADGRA1Q86SQ6 560 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TTC6Q86TZ1 520 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 NCAPG2Q86XI2 1143 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 FBXL6Q8N531 539 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 EDAQ92838 391 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 NEUROD6Q96NK8 337 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TANGO6Q9C0B7 1094 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CNPY2Q9Y2B0 182 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SPEGQ15772 3267 aa8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 COL11A1P12107 1806 aaPredicted RBP8.75□□□□□ -1.01
CDK5RAP3-209ENST00000578663 A0A0U1RQG5 324 aaPredicted RBP8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ARVCFO00192 962 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TLR3O15455 904 aaKnown RBP8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SRGAP3O43295 1099 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 DUSP11O75319 330 aaKnown RBP8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CA3P07451 260 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 GUCY1A2P33402 732 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SHMT1P34896 483 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ZNF792Q3KQV3 632 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SUGP1Q8IWZ8 645 aaKnown RBP8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 FAM126BQ8IXS8 530 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PCSK9Q8NBP7 692 aaKnown RBP8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ZNF512BQ96KM6 892 aaPredicted RBP8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 MMP19Q99542 508 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 GPR108Q9NPR9 543 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 FAM184BQ9ULE4 1060 aa8.74□□□□□ -1.01
CDK5RAP3-209ENST00000578663 A0A1W2PRG0 241 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 APBB1O00213 710 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 FLOT1O75955 427 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CD4P01730 458 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 FGBP02675 491 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TAL1P17542 331 aaPredicted RBP8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 NKX3-2P78367 333 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 GABPAQ06546 454 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PLS1Q14651 629 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 KCNA10Q16322 511 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TRIM67Q6ZTA4 783 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 RIOX2Q8IUF8 465 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TRMT2AQ8IZ69 625 aaKnown RBP8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ARNTL2Q8WYA1 636 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ATG4CQ96DT6 458 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SEZ6LQ9BYH1 1024 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 UPF3AQ9H1J1 476 aaKnown RBP8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SH2D4AQ9H788 454 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SPC25Q9HBM1 224 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ADAMTS5Q9UNA0 930 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ZNF536O15090 1300 aa8.73□□□□□ -1.01
CDK5RAP3-209ENST00000578663 OTOGLQ3ZCN5 2332 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 MYO5AQ9Y4I1 1855 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 WDR46O15213 610 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CYP2E1P05181 493 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 GNAI3P08754 354 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 AVPR2P30518 371 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 USP5P45974 858 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TAP1Q03518 808 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PUM1Q14671 1186 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TMEM132BQ14DG7 1078 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SEPT2Q15019 361 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 MAMDC4Q6UXC1 1216 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 TMEM179Q6ZVK1 233 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 OTOP2Q7RTS6 562 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 ZNF467Q7Z7K2 595 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 MAGEB6Q8N7X4 407 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 NEK9Q8TD19 979 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 LENG1Q96BZ8 264 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 MEIS3Q99687 375 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 PPP1R12CQ9BZL4 782 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 API5Q9BZZ5 524 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 SH2B1Q9NRF2 756 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 NAV1Q8NEY1 1877 aa8.72□□□□□ -1.01
CDK5RAP3-209ENST00000578663 FRYQ5TBA9 3013 aa8.71□□□□□ -1.01
CDK5RAP3-209ENST00000578663 CYSRT1A8MQ03 144 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ZIC2O95409 532 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PGK2P07205 417 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ASGR1P07306 291 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PFKMP08237 780 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CYP7A1P22680 504 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 GJA9P57773 515 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 DYNLL1P63167 89 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CCDC158Q5M9N0 1113 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 TTC39AQ5SRH9 613 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 FRMD5Q7Z6J6 570 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 RNF135Q8IUD6 432 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ADHFE1Q8IWW8 467 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SLC43A3Q8NBI5 491 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 NKD2Q969F2 451 aaPredicted RBP8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 VWCEQ96DN2 955 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 UPF3BQ9BZI7 483 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 HIPK3Q9H422 1215 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 VCPKMTQ9H867 229 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ARHGEF10LQ9HCE6 1279 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SNRKQ9NRH2 765 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SMC4Q9NTJ3 1288 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 DLL3Q9NYJ7 618 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PRKAG3Q9UGI9 489 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ZNF214Q9UL59 606 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms