RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.04■■□□□ 1.62e-6■■■□□ 14.8
TSEN54-205ENST00000578415 KATNBL1Q9H079 304 aa25.04■■□□□ 1.6
TSEN54-205ENST00000578415 ABHD16BQ9H3Z7 469 aa25.04■■□□□ 1.6
TSEN54-205ENST00000578415 FBXO40Q9UH90 709 aa25.04■■□□□ 1.6
TSEN54-205ENST00000578415 TTLL1O95922 423 aa25.03■■□□□ 1.6
TSEN54-205ENST00000578415 ASGR1P07306 291 aa25.03■■□□□ 1.6
TSEN54-205ENST00000578415 ZFYP08048 801 aaPredicted RBP25.03■■□□□ 1.6
TSEN54-205ENST00000578415 GNAT2P19087 354 aa25.03■■□□□ 1.6
TSEN54-205ENST00000578415 OAZ1P54368 228 aa25.03■■□□□ 1.6
TSEN54-205ENST00000578415 GJA9P57773 515 aa25.03■■□□□ 1.6
TSEN54-205ENST00000578415 MFSD5Q6N075 450 aa25.03■■□□□ 1.6
TSEN54-205ENST00000578415 PCSK9Q8NBP7 692 aaKnown RBP25.03■■□□□ 1.6
TSEN54-205ENST00000578415 ZNF287Q9HBT7 754 aa25.03■■□□□ 1.6
TSEN54-205ENST00000578415 PLIN4Q96Q06 1357 aa25.03■■□□□ 1.6
TSEN54-205ENST00000578415 CTAGE5O15320 804 aa25.02■■□□□ 1.6
TSEN54-205ENST00000578415 APPP05067 770 aa25.02■■□□□ 1.6
TSEN54-205ENST00000578415 C16orf59Q7L2K0 433 aa25.02■■□□□ 1.6
TSEN54-205ENST00000578415 CCDC144CPQ8IYA2 1237 aa25.02■■□□□ 1.6
TSEN54-205ENST00000578415 GPATCH3Q96I76 525 aa25.02■■□□□ 1.6
TSEN54-205ENST00000578415 DCTPP1Q9H773 170 aa25.02■■□□□ 1.6
TSEN54-205ENST00000578415 MROH7Q68CQ1 1323 aa25.02■■□□□ 1.6
TSEN54-205ENST00000578415 PATL2C9JE40 543 aaKnown RBP25.01■■□□□ 1.59
TSEN54-205ENST00000578415 CNTN2Q02246 1040 aa25.01■■□□□ 1.59
TSEN54-205ENST00000578415 SLFN13Q68D06 897 aa25.01■■□□□ 1.59
TSEN54-205ENST00000578415 IFNL3Q8IZI9 196 aa25.01■■□□□ 1.59
TSEN54-205ENST00000578415 NEDD1Q8NHV4 660 aa25.01■■□□□ 1.59
TSEN54-205ENST00000578415 SPC25Q9HBM1 224 aa25.01■■□□□ 1.59
TSEN54-205ENST00000578415 HOMER2Q9NSB8 354 aa25.01■■□□□ 1.59
TSEN54-205ENST00000578415 A0A0U1RQG5 324 aaPredicted RBP25■■□□□ 1.59
TSEN54-205ENST00000578415 ARVCFO00192 962 aa25■■□□□ 1.59
TSEN54-205ENST00000578415 BMP3P12645 472 aa25■■□□□ 1.59
TSEN54-205ENST00000578415 GNASQ5JWF2 1037 aa25■■□□□ 1.59
TSEN54-205ENST00000578415 TMEM240Q5SV17 173 aa25■■□□□ 1.59
TSEN54-205ENST00000578415 FAM126BQ8IXS8 530 aa25■■□□□ 1.59
TSEN54-205ENST00000578415 CSF2RAP15509 400 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 NKX3-2P78367 333 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 PPIGQ13427 754 aaKnown RBP eCLIP24.99■■□□□ 1.594e-7■■□□□ 14.4
TSEN54-205ENST00000578415 RASIP1Q5U651 963 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 FAM133AQ8N9E0 248 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 USP38Q8NB14 1042 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 VTI1AQ96AJ9 217 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 TIFAQ96CG3 184 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 SEC62Q99442 399 aaKnown RBP24.99■■□□□ 1.59
TSEN54-205ENST00000578415 ZNF576Q9H609 170 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 MYH4Q9Y623 1939 aa24.99■■□□□ 1.59
TSEN54-205ENST00000578415 ASTN1O14525 1302 aa24.98■■□□□ 1.59
TSEN54-205ENST00000578415 ZNF536O15090 1300 aa24.98■■□□□ 1.59
TSEN54-205ENST00000578415 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.98■■□□□ 1.59
TSEN54-205ENST00000578415 TMEM232C9JQI7 657 aa24.98■■□□□ 1.59
TSEN54-205ENST00000578415 TSPY3P0CV98 308 aa24.98■■□□□ 1.59
TSEN54-205ENST00000578415 TSPY8P0CW00 308 aa24.98■■□□□ 1.59
TSEN54-205ENST00000578415 ACAD9Q9H845 621 aa24.98■■□□□ 1.59
TSEN54-205ENST00000578415 A1CFQ9NQ94 594 aaKnown RBP24.98■■□□□ 1.59
TSEN54-205ENST00000578415 TTC28Q96AY4 2481 aa24.97■■□□□ 1.59
TSEN54-205ENST00000578415 MCM3APO60318 1980 aa24.97■■□□□ 1.59
TSEN54-205ENST00000578415 FDX1P10109 184 aa24.97■■□□□ 1.59
TSEN54-205ENST00000578415 STAT2P52630 851 aa24.97■■□□□ 1.59
TSEN54-205ENST00000578415 BEX3Q00994 111 aa24.97■■□□□ 1.59
TSEN54-205ENST00000578415 AGBL1Q96MI9 1066 aa24.97■■□□□ 1.59
TSEN54-205ENST00000578415 PPP1R12CQ9BZL4 782 aa24.97■■□□□ 1.59
TSEN54-205ENST00000578415 SOWAHBA6NEL2 793 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 GRXCR1A8MXD5 290 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 PBX2P40425 430 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 TFAP4Q01664 338 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 PDE4BQ07343 736 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 GMCL1Q96IK5 515 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 PBX4Q9BYU1 374 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 NACAP1Q9BZK3 213 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 RNF146Q9NTX7 359 aa24.96■■□□□ 1.59
TSEN54-205ENST00000578415 CD4P01730 458 aa24.95■■□□□ 1.58
TSEN54-205ENST00000578415 ACRP10323 421 aa24.95■■□□□ 1.58
TSEN54-205ENST00000578415 TNFAIP2Q03169 654 aa24.95■■□□□ 1.58
TSEN54-205ENST00000578415 PPARAQ07869 468 aa24.95■■□□□ 1.58
TSEN54-205ENST00000578415 CCDC174Q6PII3 467 aa24.95■■□□□ 1.58
TSEN54-205ENST00000578415 FAM160B2Q86V87 743 aa24.95■■□□□ 1.58
TSEN54-205ENST00000578415 TMEM199Q8N511 208 aa24.95■■□□□ 1.58
TSEN54-205ENST00000578415 ISY1Q9ULR0 285 aaKnown RBP24.95■■□□□ 1.58
TSEN54-205ENST00000578415 GNEQ9Y223 722 aaKnown RBP24.95■■□□□ 1.58
TSEN54-205ENST00000578415 PTGS1P23219 599 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 SLC1A4P43007 532 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 LRRFIP1Q32MZ4 808 aaKnown RBP24.94■■□□□ 1.58
TSEN54-205ENST00000578415 CXCL17Q6UXB2 119 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 ZNF365Q70YC5 407 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 SLC43A3Q8NBI5 491 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 PI4K2BQ8TCG2 481 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 CHURC1Q8WUH1 139 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 STAG1Q8WVM7 1258 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 CHMP4CQ96CF2 233 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 NAPBQ9H115 298 aa24.94■■□□□ 1.58
TSEN54-205ENST00000578415 DDX49Q9Y6V7 483 aaKnown RBP24.94■■□□□ 1.58
TSEN54-205ENST00000578415 TTC41PQ6P2S7 1318 aa24.93■■□□□ 1.58
TSEN54-205ENST00000578415 TLR3O15455 904 aaKnown RBP24.93■■□□□ 1.58
TSEN54-205ENST00000578415 MCCP23508 829 aa24.93■■□□□ 1.58
TSEN54-205ENST00000578415 CYP2C18P33260 490 aa24.93■■□□□ 1.58
TSEN54-205ENST00000578415 ZMYM1Q5SVZ6 1142 aa24.93■■□□□ 1.58
TSEN54-205ENST00000578415 PSRC1Q6PGN9 363 aaPredicted RBP24.93■■□□□ 1.58
TSEN54-205ENST00000578415 OTUD7AQ8TE49 926 aaPredicted RBP24.93■■□□□ 1.58
TSEN54-205ENST00000578415 TRERF1Q96PN7 1200 aa24.93■■□□□ 1.58
TSEN54-205ENST00000578415 ASB14A6NK59 587 aa24.92■■□□□ 1.58
TSEN54-205ENST00000578415 FOXP2O15409 715 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms