RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 MAMDC4Q6UXC1 1216 aa27.02■■□□□ 1.92
VAPA-205ENST00000578314 ZNF467Q7Z7K2 595 aaPredicted RBP27.02■■□□□ 1.92
VAPA-205ENST00000578314 ANKS1AQ92625 1134 aa27.02■■□□□ 1.92
VAPA-205ENST00000578314 PRO3102Q9H379 93 aa27.02■■□□□ 1.92
VAPA-205ENST00000578314 SNHG28P0DPA3 235 aa27.01■■□□□ 1.91
VAPA-205ENST00000578314 PDHBP11177 359 aa27.01■■□□□ 1.91
VAPA-205ENST00000578314 IQCA1Q86XH1 822 aa27.01■■□□□ 1.91
VAPA-205ENST00000578314 ZKSCAN3Q9BRR0 538 aa27.01■■□□□ 1.91
VAPA-205ENST00000578314 ACAD9Q9H845 621 aa27.01■■□□□ 1.91
VAPA-205ENST00000578314 SYNGAP1Q96PV0 1343 aa27■■□□□ 1.91
VAPA-205ENST00000578314 ZNF865P0CJ78 1059 aaPredicted RBP27■■□□□ 1.91
VAPA-205ENST00000578314 ARRDC4Q8NCT1 418 aa27■■□□□ 1.91
VAPA-205ENST00000578314 KRT23Q9C075 422 aa27■■□□□ 1.91
VAPA-205ENST00000578314 RANBP17Q9H2T7 1088 aaKnown RBP27■■□□□ 1.91
VAPA-205ENST00000578314 ZSWIM5Q9P217 1185 aa27■■□□□ 1.91
VAPA-205ENST00000578314 B4E1Z4 1266 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 DNM1LO00429 736 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 TAL1P17542 331 aaPredicted RBP26.99■■□□□ 1.91
VAPA-205ENST00000578314 SLC16A2P36021 539 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 SNAP25P60880 206 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 SYDE2Q5VT97 1194 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 CCDC174Q6PII3 467 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 TRERF1Q96PN7 1200 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 CNNM2Q9H8M5 875 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 GPCPD1Q9NPB8 672 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 HOMER2Q9NSB8 354 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 RNF146Q9NTX7 359 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 FRMPD3Q5JV73 1810 aa26.99■■□□□ 1.91
VAPA-205ENST00000578314 ZNFX1Q9P2E3 1918 aaKnown RBP26.98■■□□□ 1.91
VAPA-205ENST00000578314 FRMPD2Q68DX3 1309 aaPredicted RBP26.98■■□□□ 1.91
VAPA-205ENST00000578314 SGSM2O43147 1006 aa26.98■■□□□ 1.91
VAPA-205ENST00000578314 SNAI1O95863 264 aaPredicted RBP26.98■■□□□ 1.91
VAPA-205ENST00000578314 ZNF543Q08ER8 600 aa26.98■■□□□ 1.91
VAPA-205ENST00000578314 FGD4Q96M96 766 aa26.98■■□□□ 1.91
VAPA-205ENST00000578314 ZSCAN10Q96SZ4 725 aaPredicted RBP26.98■■□□□ 1.91
VAPA-205ENST00000578314 CNPY2Q9Y2B0 182 aa26.98■■□□□ 1.91
VAPA-205ENST00000578314 ICAM1P05362 532 aa26.97■■□□□ 1.91
VAPA-205ENST00000578314 ALAS1P13196 640 aa26.97■■□□□ 1.91
VAPA-205ENST00000578314 PTH1RQ03431 593 aa26.97■■□□□ 1.91
VAPA-205ENST00000578314 ANO1Q5XXA6 986 aa26.97■■□□□ 1.91
VAPA-205ENST00000578314 C7orf61Q8IZ16 206 aa26.97■■□□□ 1.91
VAPA-205ENST00000578314 A1CFQ9NQ94 594 aaKnown RBP26.97■■□□□ 1.91
VAPA-205ENST00000578314 GJC2Q5T442 439 aaPredicted RBP26.96■■□□□ 1.91
VAPA-205ENST00000578314 CENPQQ7L2Z9 268 aaPredicted RBP26.96■■□□□ 1.91
VAPA-205ENST00000578314 FAM133AQ8N9E0 248 aa26.96■■□□□ 1.91
VAPA-205ENST00000578314 SENP6Q9GZR1 1112 aaPredicted RBP26.96■■□□□ 1.91
VAPA-205ENST00000578314 CCPG1Q9ULG6 757 aa26.96■■□□□ 1.91
VAPA-205ENST00000578314 POTEB2H3BUK9 544 aa26.95■■□□□ 1.9
VAPA-205ENST00000578314 AKR1A1P14550 325 aa26.95■■□□□ 1.9
VAPA-205ENST00000578314 GPATCH4Q5T3I0 446 aaKnown RBP26.95■■□□□ 1.9
VAPA-205ENST00000578314 ENAHQ8N8S7 591 aaPredicted RBP26.95■■□□□ 1.9
VAPA-205ENST00000578314 PNMA1Q8ND90 353 aa26.95■■□□□ 1.9
VAPA-205ENST00000578314 RARBP10826 455 aa26.94■■□□□ 1.9
VAPA-205ENST00000578314 CNTN2Q02246 1040 aa26.94■■□□□ 1.9
VAPA-205ENST00000578314 LRRC41Q15345 812 aa26.94■■□□□ 1.9
VAPA-205ENST00000578314 LRRC26Q2I0M4 334 aa26.94■■□□□ 1.9
VAPA-205ENST00000578314 MUM1L1Q5H9M0 696 aa26.94■■□□□ 1.9
VAPA-205ENST00000578314 KAT14Q9H8E8 782 aa26.94■■□□□ 1.9
VAPA-205ENST00000578314 U3KPZ7 1027 aaPredicted RBP26.94■■□□□ 1.9
VAPA-205ENST00000578314 LAMA4Q16363 1823 aa26.93■■□□□ 1.9
VAPA-205ENST00000578314 CYP21A2P08686 494 aa26.93■■□□□ 1.9
VAPA-205ENST00000578314 XPNPEP3Q9NQH7 507 aa26.93■■□□□ 1.9
VAPA-205ENST00000578314 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.93■■□□□ 1.9
VAPA-205ENST00000578314 CYP39A1Q9NYL5 469 aa26.93■■□□□ 1.9
VAPA-205ENST00000578314 PNMA2Q9UL42 364 aa26.93■■□□□ 1.9
VAPA-205ENST00000578314 TNKSO95271 1327 aa26.92■■□□□ 1.9
VAPA-205ENST00000578314 KBTBD13C9JR72 458 aa26.92■■□□□ 1.9
VAPA-205ENST00000578314 ACVR2BQ13705 512 aa26.92■■□□□ 1.9
VAPA-205ENST00000578314 MAP4K1Q92918 833 aa26.92■■□□□ 1.9
VAPA-205ENST00000578314 UBAC1Q9BSL1 405 aa26.92■■□□□ 1.9
VAPA-205ENST00000578314 ABHD16BQ9H3Z7 469 aa26.92■■□□□ 1.9
VAPA-205ENST00000578314 FAM184BQ9ULE4 1060 aa26.92■■□□□ 1.9
VAPA-205ENST00000578314 ZMYND8Q9ULU4 1186 aaPredicted RBP26.92■■□□□ 1.9
VAPA-205ENST00000578314 SZT2Q5T011 3432 aa26.91■■□□□ 1.9
VAPA-205ENST00000578314 A0A1W2PPC1 479 aa26.91■■□□□ 1.9
VAPA-205ENST00000578314 SOWAHBA6NEL2 793 aa26.91■■□□□ 1.9
VAPA-205ENST00000578314 GOLGA8HP0CJ92 632 aa26.91■■□□□ 1.9
VAPA-205ENST00000578314 ARMCX2Q7L311 632 aa26.91■■□□□ 1.9
VAPA-205ENST00000578314 TRDNQ13061 729 aa26.9■■□□□ 1.9
VAPA-205ENST00000578314 SEC23AQ15436 765 aa26.9■■□□□ 1.9
VAPA-205ENST00000578314 CCDC144CPQ8IYA2 1237 aa26.9■■□□□ 1.9
VAPA-205ENST00000578314 ZHX1Q9UKY1 873 aaPredicted RBP26.9■■□□□ 1.9
VAPA-205ENST00000578314 PLXNA1Q9UIW2 1896 aa26.89■■□□□ 1.9
VAPA-205ENST00000578314 ASB14A6NK59 587 aa26.89■■□□□ 1.9
VAPA-205ENST00000578314 CYB5R4Q7L1T6 521 aa26.89■■□□□ 1.9
VAPA-205ENST00000578314 RNF180Q86T96 592 aa26.89■■□□□ 1.9
VAPA-205ENST00000578314 UBA5Q9GZZ9 404 aa26.89■■□□□ 1.9
VAPA-205ENST00000578314 KATNBL1Q9H079 304 aa26.89■■□□□ 1.9
VAPA-205ENST00000578314 WDR19Q8NEZ3 1342 aa26.89■■□□□ 1.89
VAPA-205ENST00000578314 DNAH12Q6ZR08 3092 aa26.88■■□□□ 1.89
VAPA-205ENST00000578314 PGK1P00558 417 aa26.88■■□□□ 1.89
VAPA-205ENST00000578314 MYCNP04198 464 aaPredicted RBP26.88■■□□□ 1.89
VAPA-205ENST00000578314 ATN1P54259 1190 aaPredicted RBP26.88■■□□□ 1.89
VAPA-205ENST00000578314 ASPRV1Q53RT3 343 aa26.88■■□□□ 1.89
VAPA-205ENST00000578314 NSMFQ6X4W1 530 aa26.88■■□□□ 1.89
VAPA-205ENST00000578314 GDF15Q99988 308 aa26.88■■□□□ 1.89
VAPA-205ENST00000578314 PHF24Q9UPV7 400 aa26.88■■□□□ 1.89
VAPA-205ENST00000578314 ADAMTS4O75173 837 aa26.87■■□□□ 1.89
VAPA-205ENST00000578314 DUSP11O75319 330 aaKnown RBP26.87■■□□□ 1.89
VAPA-205ENST00000578314 SYN1P17600 705 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms