RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 CNTNAP5Q8WYK1 1306 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 ERVV-1B6SEH8 477 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 CALM1P0DP23 149 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 CALM2P0DP24 149 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 CALM3P0DP25 149 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 FCER1AP12319 257 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 MAPKAPK5Q8IW41 473 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 NOC4LQ9BVI4 516 aaKnown RBP16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 ZHX3Q9H4I2 956 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 DCP1AQ9NPI6 582 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 EXOC1Q9NV70 894 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 GLI3P10071 1580 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 KIF5BP33176 963 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 TXKP42681 527 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 NAPAP54920 295 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 ZNF444Q8N0Y2 327 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 SPATA20Q8TB22 786 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 TUBGCP2Q9BSJ2 902 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 LACRTQ9GZZ8 138 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 SAR1BQ9Y6B6 198 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 PARP4Q9UKK3 1724 aaKnown RBP16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 PLEKP08567 350 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 ARHGAP25P42331 645 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 SLC7A5Q01650 507 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 FUT2Q10981 343 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 MINPP1Q9UNW1 487 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 PDXDC2PQ6P474 469 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 MB21D1Q8N884 522 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 TGFBRAP1Q8WUH2 860 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 UBA5Q9GZZ9 404 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 GOLGB1Q14789 3259 aaKnown RBP16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 CCDC42Q96M95 316 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
CUEDC1-206ENST00000577830 HIBADHP31937 336 aaKnown RBP16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 TXNRD3Q86VQ6 643 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 KANSL2Q9H9L4 492 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 DISC1Q9NRI5 854 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 BIN2Q9UBW5 565 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 POTEB2H3BUK9 544 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 SPA17Q15506 151 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 NPY5RQ15761 445 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 C2CD5Q86YS7 1000 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 ZNF384Q8TF68 577 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 SMARCC1Q92922 1105 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 TBC1D7Q9P0N9 293 aa16.48■□□□□ 0.23
CUEDC1-206ENST00000577830 ATP8B1O43520 1251 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 AKR1B10O60218 316 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 PLCG1P19174 1290 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 LRRC41Q15345 812 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 CCDC47Q96A33 483 aaKnown RBP16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 ACBD3Q9H3P7 528 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 LRWD1Q9UFC0 647 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 L1RE1Q9UN81 338 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 REXO2Q9Y3B8 237 aaKnown RBP16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 KRT86O43790 486 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 RNF40O75150 1001 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 CAMTA2O94983 1202 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 PBX1P40424 430 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 WHAMMP3Q1A5X7 153 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 TDRD12Q587J7 1177 aaKnown RBP16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 CDK5RAP3Q96JB5 506 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 GBP3Q9H0R5 595 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 LIMA1Q9UHB6 759 aaKnown RBP16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 CCDC181Q5TID7 509 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 MLXIPQ9HAP2 919 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 ATRNO75882 1429 aa16.47■□□□□ 0.23
CUEDC1-206ENST00000577830 RCCD1A6NED2 376 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 NTSR2O95665 410 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 ACTN2P35609 894 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 E2F4Q16254 413 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 PFKFB3Q16875 520 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 CABP7Q86V35 215 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 GJA10Q969M2 543 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 CCDC51Q96ER9 411 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 CNOT6LQ96LI5 555 aaKnown RBP16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 H7C1D1 291 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 BUB1O43683 1085 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 CYLC1P35663 651 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 KIF5AQ12840 1032 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 NHEJ1Q9H9Q4 299 aaPredicted RBP16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 NLRC4Q9NPP4 1024 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 TJP1Q07157 1748 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 MYO1CO00159 1063 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 STK4Q13043 487 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 PARP10Q53GL7 1025 aa16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 NSUN4Q96CB9 384 aaKnown RBP16.46■□□□□ 0.23
CUEDC1-206ENST00000577830 DDAH1O94760 285 aa16.45■□□□□ 0.22
CUEDC1-206ENST00000577830 CALML3P27482 149 aa16.45■□□□□ 0.22
CUEDC1-206ENST00000577830 HERVK_113P62684 666 aa16.45■□□□□ 0.22
CUEDC1-206ENST00000577830 SOGA3Q5TF21 947 aa16.45■□□□□ 0.22
CUEDC1-206ENST00000577830 IRF2BP1Q8IU81 584 aa16.45■□□□□ 0.22
CUEDC1-206ENST00000577830 CENPHQ9H3R5 247 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms