RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 SHHQ15465 462 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 SLC39A5Q6ZMH5 540 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 CERS3Q8IU89 383 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 MAGEB6Q8N7X4 407 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 ACER1Q8TDN7 264 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 C12orf42Q96LP6 360 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 CDX2Q99626 313 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 KIAA1683Q9H0B3 1180 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 CCDC8Q9H0W5 538 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 SEMA6BQ9H3T3 888 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 GPR108Q9NPR9 543 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 HOXC10Q9NYD6 342 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 SZT2Q5T011 3432 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 IGSF3O75054 1194 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 ADAM23O75077 832 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 HOXC6P09630 235 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 TRIM27P14373 513 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 MAP3K12Q12852 859 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 GRB14Q14449 540 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 COG2Q14746 738 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 PRAMEF19Q5SWL8 479 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 TATDN1Q6P1N9 297 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 TRPV1Q8NER1 839 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 MAFAQ8NHW3 353 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 BADQ92934 168 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 FERMT2Q96AC1 680 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 SCARF2Q96GP6 870 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 TANGO6Q9C0B7 1094 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 SLC5A4Q9NY91 659 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 TNNQ9UQP3 1299 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 MYH13Q9UKX3 1938 aa8.33□□□□□ -1.08
SMARCE1-212ENST00000577721 STRNO43815 780 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 TIMP2P16035 220 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 ERCC3P19447 782 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 ADORA2AP29274 412 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 ADCYAP1R1P41586 468 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 ATP8B2P98198 1209 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 KRT76Q01546 638 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 SEPT2Q15019 361 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 TRIM60Q495X7 471 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 C9orf50Q5SZB4 431 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 LBX2Q6XYB7 198 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 NCAPG2Q86XI2 1143 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 MYLIPQ8WY64 445 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 ZNF512BQ96KM6 892 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 MOV10L1Q9BXT6 1211 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 EHD4Q9H223 541 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 CEP290O15078 2479 aa8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 DDX60LQ5H9U9 1706 aaKnown RBP8.32□□□□□ -1.08
SMARCE1-212ENST00000577721 PHIPQ8WWQ0 1821 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 MAGEB6P1A0A0J9YX57 407 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 SEPT4O43236 478 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 COBLO75128 1261 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 KDM4AO75164 1064 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 CYBAP13498 195 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 PLCD1P51178 756 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 OLFML2BQ68BL8 750 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 PTCRAQ6ISU1 281 aaPredicted RBP8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 TMEM57Q8N5G2 664 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 SPATC1LQ9H0A9 340 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 BCL11AQ9H165 835 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 C1orf115Q9H7X2 142 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 MCM9Q9NXL9 1143 aa8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 TLR7Q9NYK1 1049 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 DBNLQ9UJU6 430 aaKnown RBP8.31□□□□□ -1.08
SMARCE1-212ENST00000577721 TRIM43BA6NCK2 446 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 MSTNO14793 375 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 FLOT1O75955 427 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 UPP2O95045 317 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 FCER1AP12319 257 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 FOSL2P15408 326 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 RAG1P15918 1043 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 SHMT1P34896 483 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 SMAD3P84022 425 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 TLE2Q04725 743 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 LRRC41Q15345 812 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 C6orf118Q5T5N4 469 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 SH3RF1Q7Z6J0 888 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 MB21D1Q8N884 522 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 SHCBP1Q8NEM2 672 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 SSH3Q8TE77 659 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 SYMPKQ92797 1274 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 TRIM43Q96BQ3 446 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 EAF2Q96CJ1 260 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 RNPC3Q96LT9 517 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 CRNKL1Q9BZJ0 848 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 MROH8Q9H579 483 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 ANTXR1Q9H6X2 564 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 TACC3Q9Y6A5 838 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 LOC285556D6RIA3 1793 aa8.3□□□□□ -1.08
SMARCE1-212ENST00000577721 A0A1W2PRG0 241 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 RAD21O60216 631 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 RARBP10826 455 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 VARSP26640 1264 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 GUCY1A2P33402 732 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 USP46P62068 366 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 SLC9C2Q5TAH2 1124 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 ZKSCAN2Q63HK3 967 aa8.29□□□□□ -1.08
SMARCE1-212ENST00000577721 RNF180Q86T96 592 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms