RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 USP6NLQ92738 828 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 JAG2Q9Y219 1238 aa9.65□□□□□ -0.86
CDH8-203ENST00000577390 MYO1EQ12965 1108 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 PKP1Q13835 747 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 KCNG4Q8TDN1 519 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 MAIP1Q8WWC4 291 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 ATP6V0A4Q9HBG4 840 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 MYO5CQ9NQX4 1742 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 IQANK1A0A1B0GTG1 560 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 IRX4P78413 519 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.87
CDH8-203ENST00000577390 SCOCQ9UIL1 159 aa9.65□□□□□ -0.87
CDH8-203ENST00000577390 ORC4O43929 436 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 PPARDQ03181 441 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 KRT77Q7Z794 578 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 CPXCR1Q8N123 301 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 TRIML2Q8N7C3 387 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 MAGED2Q9UNF1 606 aaPredicted RBP9.64□□□□□ -0.87
CDH8-203ENST00000577390 ARHGAP42A6NI28 874 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 BPIFB4P59827 614 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 SNX1Q13596 522 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
CDH8-203ENST00000577390 RSAD2Q8WXG1 361 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 SNX19Q92543 992 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 CABP1Q9NZU7 370 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 BCAP29Q9UHQ4 241 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 KRT7P08729 469 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 WTAPQ15007 396 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 ANGPT1Q15389 498 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 HERC4Q5GLZ8 1057 aaPredicted RBP9.64□□□□□ -0.87
CDH8-203ENST00000577390 FSCBQ5H9T9 825 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
CDH8-203ENST00000577390 TAGAPQ8N103 731 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 SSH1Q8WYL5 1049 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 LZTFL1Q9NQ48 299 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 TTC4O95801 387 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 KAZNQ674X7 775 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 ARHGAP27Q6ZUM4 889 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 UTP11Q9Y3A2 253 aaKnown RBP9.64□□□□□ -0.87
CDH8-203ENST00000577390 SMCO2A6NFE2 343 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 TROVE2P10155 538 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDH8-203ENST00000577390 TRIM42Q8IWZ5 723 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 RPRD1BQ9NQG5 326 aaKnown RBP9.64□□□□□ -0.87
CDH8-203ENST00000577390 SELENONQ9NZV5 590 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 ARHGAP22Q7Z5H3 698 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 FCHSD1Q86WN1 690 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 APOL6Q9BWW8 343 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 NSFL1CQ9UNZ2 370 aaKnown RBP9.64□□□□□ -0.87
CDH8-203ENST00000577390 SPATA31E1Q6ZUB1 1445 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 FLOT1O75955 427 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 TPP2P29144 1249 aaPredicted RBP9.64□□□□□ -0.87
CDH8-203ENST00000577390 OSBPL1AQ9BXW6 950 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 RTL1A6NKG5 1358 aa9.64□□□□□ -0.87
CDH8-203ENST00000577390 ZSCAN9O15535 394 aaPredicted RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 TPD52L2O43399 206 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 TMEM132EQ6IEE7 984 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 HS6ST3Q8IZP7 471 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 CACTINQ8WUQ7 758 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 ZCCHC17Q9NP64 241 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 RGS12O14924 1447 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 PSMA7O14818 248 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 AP1G2O75843 785 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 MAP3K21Q5TCX8 1036 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 PARD6BQ9BYG5 372 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 DMAP1Q9NPF5 467 aaPredicted RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 SATB2Q9UPW6 733 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 YEATS2Q9ULM3 1422 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 CENPAP49450 140 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 RUFY4Q6ZNE9 571 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 PLEKHM3Q6ZWE6 761 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 NECAB1Q8N987 351 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 NLRP3Q96P20 1036 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 KCNF1Q9H3M0 494 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 MAN1C1Q9NR34 630 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 TTF2Q9UNY4 1162 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 POLR2BP30876 1174 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 FLOT2Q14254 428 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 PRPSAP1Q14558 356 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 YAF2Q8IY57 180 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 PPWD1Q96BP3 646 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 ZBTB3Q9H5J0 574 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 H2AFXP16104 143 aaPredicted RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDH8-203ENST00000577390 CCT7Q99832 543 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 ASCC2Q9H1I8 757 aaPredicted RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 H7C1D1 291 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 SLC9A1P19634 815 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 GPR1P46091 355 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 RAB44Q7Z6P3 723 aaPredicted RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 KIAA0825Q8IV33 1275 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 BBS5Q8N3I7 341 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 IFIH1Q9BYX4 1025 aaKnown RBP9.63□□□□□ -0.87
CDH8-203ENST00000577390 STK32BQ9NY57 414 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 LCMT1Q9UIC8 334 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 MYH3P11055 1940 aa9.63□□□□□ -0.87
CDH8-203ENST00000577390 F8W8V4 182 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms