RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 MAMDC4Q6UXC1 1216 aa20.4■□□□□ 0.86
ABR-236ENST00000577052 ANKRD33Q7Z3H0 272 aa20.4■□□□□ 0.86
ABR-236ENST00000577052 ZNF589Q86UQ0 364 aaPredicted RBP20.4■□□□□ 0.86
ABR-236ENST00000577052 AMOTL1Q8IY63 956 aa20.4■□□□□ 0.86
ABR-236ENST00000577052 MAFAQ8NHW3 353 aaPredicted RBP20.4■□□□□ 0.86
ABR-236ENST00000577052 SYNGAP1Q96PV0 1343 aa20.39■□□□□ 0.85
ABR-236ENST00000577052 M0R2C6 588 aa20.39■□□□□ 0.85
ABR-236ENST00000577052 ZSCAN25Q6NSZ9 544 aa20.39■□□□□ 0.85
ABR-236ENST00000577052 APPBP2Q92624 585 aa20.39■□□□□ 0.85
ABR-236ENST00000577052 TBC1D32Q96NH3 1257 aa20.39■□□□□ 0.85
ABR-236ENST00000577052 TSEN34Q9BSV6 310 aaKnown RBP20.39■□□□□ 0.85
ABR-236ENST00000577052 TEX13BQ9BXU2 312 aa20.39■□□□□ 0.85
ABR-236ENST00000577052 UPF2Q9HAU5 1272 aaKnown RBP20.39■□□□□ 0.85
ABR-236ENST00000577052 HELLSQ9NRZ9 838 aa20.39■□□□□ 0.85
ABR-236ENST00000577052 MINDY4BA8MYZ0 360 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 ATP2A1O14983 1001 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 PRDM1O75626 825 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 COPB2P35606 906 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 KCNA10Q16322 511 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 CCDC129Q6ZRS4 1044 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.38■□□□□ 0.85
ABR-236ENST00000577052 DDRGK1Q96HY6 314 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 RNPC3Q96LT9 517 aaKnown RBP20.38■□□□□ 0.85
ABR-236ENST00000577052 USP26Q9BXU7 913 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 LSG1Q9H089 658 aaKnown RBP20.38■□□□□ 0.85
ABR-236ENST00000577052 RAVER2Q9HCJ3 691 aaKnown RBP20.38■□□□□ 0.85
ABR-236ENST00000577052 ANO2Q9NQ90 1003 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 CLIP2Q9UDT6 1046 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 CNPY2Q9Y2B0 182 aa20.38■□□□□ 0.85
ABR-236ENST00000577052 CCDC171Q6TFL3 1326 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 CTAGE5O15320 804 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 RAG1P15918 1043 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 MCMDC2Q4G0Z9 681 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 C16orf59Q7L2K0 433 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 CPXCR1Q8N123 301 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 MSL3Q8N5Y2 521 aaKnown RBP20.37■□□□□ 0.85
ABR-236ENST00000577052 TOX2Q96NM4 488 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 KATNBL1Q9H079 304 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 STARD7Q9NQZ5 370 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 TMEM39AQ9NV64 488 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 ZHX1Q9UKY1 873 aaPredicted RBP20.37■□□□□ 0.85
ABR-236ENST00000577052 TBX21Q9UL17 535 aa20.37■□□□□ 0.85
ABR-236ENST00000577052 CDK7P50613 346 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 FPGSQ05932 587 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 GIMAP6Q6P9H5 292 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 PRPF38AQ8NAV1 312 aaKnown RBP20.36■□□□□ 0.85
ABR-236ENST00000577052 MKL1Q969V6 931 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 CEP95Q96GE4 821 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 C22orf23Q9BZE7 217 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 MKNK2Q9HBH9 465 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 SLC38A10Q9HBR0 1119 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 FAM184BQ9ULE4 1060 aa20.36■□□□□ 0.85
ABR-236ENST00000577052 RBM19Q9Y4C8 960 aaKnown RBP20.36■□□□□ 0.85
ABR-236ENST00000577052 GPAA1O43292 621 aa20.35■□□□□ 0.85
ABR-236ENST00000577052 DUSP11O75319 330 aaKnown RBP20.35■□□□□ 0.85
ABR-236ENST00000577052 CST5P28325 142 aaPredicted RBP20.35■□□□□ 0.85
ABR-236ENST00000577052 SLC4A3P48751 1232 aa20.35■□□□□ 0.85
ABR-236ENST00000577052 PTH1RQ03431 593 aa20.35■□□□□ 0.85
ABR-236ENST00000577052 ACVR2BQ13705 512 aa20.35■□□□□ 0.85
ABR-236ENST00000577052 GRIN2CQ14957 1233 aa20.35■□□□□ 0.85
ABR-236ENST00000577052 ZNF467Q7Z7K2 595 aaPredicted RBP20.35■□□□□ 0.85
ABR-236ENST00000577052 LRRC47Q8N1G4 583 aaKnown RBP20.35■□□□□ 0.85
ABR-236ENST00000577052 KIFC2Q96AC6 838 aa20.35■□□□□ 0.85
ABR-236ENST00000577052 DDX11Q96FC9 970 aa20.35■□□□□ 0.85
ABR-236ENST00000577052 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.35■□□□□ 0.85
ABR-236ENST00000577052 MTMR4Q9NYA4 1195 aa20.35■□□□□ 0.85
ABR-236ENST00000577052 MOXD2PA6NHM9 499 aa20.34■□□□□ 0.85
ABR-236ENST00000577052 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
ABR-236ENST00000577052 PTGS1P23219 599 aa20.34■□□□□ 0.85
ABR-236ENST00000577052 RBM25P49756 843 aaKnown RBP20.34■□□□□ 0.85
ABR-236ENST00000577052 USP38Q8NB14 1042 aa20.34■□□□□ 0.85
ABR-236ENST00000577052 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.34■□□□□ 0.85
ABR-236ENST00000577052 UPF3AQ9H1J1 476 aaKnown RBP20.34■□□□□ 0.85
ABR-236ENST00000577052 DDX49Q9Y6V7 483 aaKnown RBP20.34■□□□□ 0.85
ABR-236ENST00000577052 ASTN1O14525 1302 aa20.33■□□□□ 0.85
ABR-236ENST00000577052 TIMP1P01033 207 aa20.33■□□□□ 0.85
ABR-236ENST00000577052 ASGR1P07306 291 aa20.33■□□□□ 0.85
ABR-236ENST00000577052 FOSL2P15408 326 aa20.33■□□□□ 0.85
ABR-236ENST00000577052 CNTN2Q02246 1040 aa20.33■□□□□ 0.85
ABR-236ENST00000577052 CCDC144BQ3MJ40 725 aa20.33■□□□□ 0.85
ABR-236ENST00000577052 ZNF536O15090 1300 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.32■□□□□ 0.84
ABR-236ENST00000577052 ZBED4O75132 1171 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 GJA9P57773 515 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 KIAA1211Q6ZU35 1233 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 ARMCX2Q7L311 632 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 IFNL3Q8IZI9 196 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 NUP133Q8WUM0 1156 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 TTC28Q96AY4 2481 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 PLIN4Q96Q06 1357 aa20.32■□□□□ 0.84
ABR-236ENST00000577052 LCTP09848 1927 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 LRRC37A2A6NM11 1700 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 TMEM265A0A087WTH1 108 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 GRXCR1A8MXD5 290 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 DCDC2CA8MYV0 355 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 FOXP2O15409 715 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 C6orf222P0C671 652 aaPredicted RBP20.31■□□□□ 0.84
ABR-236ENST00000577052 DNAJB2P25686 324 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 TMEM240Q5SV17 173 aa20.31■□□□□ 0.84
ABR-236ENST00000577052 RASIP1Q5U651 963 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms