RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 HEXIM1O94992 359 aaKnown RBP19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 OR52Z1P0C646 297 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 NYAP1Q6ZVC0 841 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 ZNF804AQ7Z570 1209 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 NLRP10Q86W26 655 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 PANX2Q96RD6 677 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 CTTNBP2NLQ9P2B4 639 aa19.79■□□□□ 0.76
ATPAF1-214ENST00000576409 MAP2K2P36507 400 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 EIF4A3P38919 411 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 LIFRP42702 1097 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 IFNAR2P48551 515 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 RPS8P62241 208 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 TCP10Q12799 353 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 PDCLQ13371 301 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 ENGASEQ8NFI3 743 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 KAZALD1Q96I82 304 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 ZC3H12CQ9C0D7 883 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 NSRP1Q9H0G5 558 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 TRIM10Q9UDY6 481 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 UTP11Q9Y3A2 253 aaKnown RBP19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 SHROOM2Q13796 1616 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 DYNLL2Q96FJ2 89 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 JRKLQ9Y4A0 524 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 MAP3K15Q6ZN16 1313 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 KRIT1O00522 736 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 ZBTB16Q05516 673 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 NHEJ1Q9H9Q4 299 aaPredicted RBP19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 MYO1AQ9UBC5 1043 aa19.78■□□□□ 0.76
ATPAF1-214ENST00000576409 NBPF26B4DH59 902 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 UFL1O94874 794 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 ZYXQ15942 572 aaKnown RBP19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 NBPF10Q6P3W6 841 aaKnown RBP19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 ATG9AQ7Z3C6 839 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 NBPF15Q8N660 670 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 ZCCHC11Q5TAX3 1644 aaKnown RBP19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 GCNT3O95395 438 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 CYP4A11Q02928 519 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 E2F5Q15329 346 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 KRT26Q7Z3Y9 468 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 ANKRD42Q8N9B4 389 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 EYA3Q99504 573 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 CCDC87Q9NVE4 849 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 DDX39AO00148 427 aaKnown RBP19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 RPL13P26373 211 aaKnown RBP19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 PARP10Q53GL7 1025 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 MYOCDQ8IZQ8 938 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 PRDM4Q9UKN5 801 aa19.77■□□□□ 0.76
ATPAF1-214ENST00000576409 TTC26A0AVF1 554 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 EPB41P11171 864 aaKnown RBP19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 TCP11X2Q5H9J9 407 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 RUFY4Q6ZNE9 571 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 FNBP4Q8N3X1 1017 aaPredicted RBP19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 ADCY7P51828 1080 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 MRFAP1Q9Y605 127 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 CPS1P31327 1500 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 MROH7-TTC4A0A0A0MT08 1334 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 FXR1P51114 621 aaKnown RBP eCLIP19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 CLNS1AP54105 237 aaKnown RBP19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 ZRSR2Q15696 482 aaKnown RBP19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 ZNF658Q5TYW1 1059 aaPredicted RBP19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 USPL1Q5W0Q7 1092 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 LY9Q9HBG7 655 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 ABHD10Q9NUJ1 306 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 LAMC1P11047 1609 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 USP17L8P0C7I0 530 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 PRCPP42785 496 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 ADCY1Q08828 1119 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 KANSL2Q9H9L4 492 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 STK38LQ9Y2H1 464 aa19.76■□□□□ 0.75
ATPAF1-214ENST00000576409 N4BP1O75113 896 aaKnown RBP19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 GGCXP38435 758 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 PLVAPQ9BX97 442 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 ARHGAP25P42331 645 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 RAD9BQ6WBX8 426 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 NEK8Q86SG6 692 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 GPBP1Q86WP2 473 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 P2RX5Q93086 422 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 GJA10Q969M2 543 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 PCDHA12Q9UN75 941 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 EIF3CLB5ME19 914 aaKnown RBP19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 EIF3CQ99613 913 aaKnown RBP19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 ASIC3Q9UHC3 531 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 ADAMTS1Q9UHI8 967 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 NFU1Q9UMS0 254 aa19.75■□□□□ 0.75
ATPAF1-214ENST00000576409 USP17L3A6NCW0 530 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 USP17L4A6NCW7 530 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 CLTAP09496 248 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 USP17L1Q7RTZ2 530 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 CCDC105Q8IYK2 499 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 TBC1D31Q96DN5 1066 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 PARP3Q9Y6F1 533 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 CYP2D6P10635 497 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 PLCG1P19174 1290 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 CYP2C19P33261 490 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 LONP1P36776 959 aaKnown RBP19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 PPP1R2P41236 205 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 FLOT1O75955 427 aa19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 RPSAP08865 295 aaKnown RBP19.74■□□□□ 0.75
ATPAF1-214ENST00000576409 USP17L2Q6R6M4 530 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms