RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZNF543Q08ER8 600 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 MAP3K21Q5TCX8 1036 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 ERICH6BQ5W0A0 696 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 MAML3Q96JK9 1138 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 AGBL1Q96MI9 1066 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 RIPK3Q9Y572 518 aa17.86■□□□□ 0.45
SMG6-220ENST00000576218 PARP1P09874 1014 aaKnown RBP17.85■□□□□ 0.45
SMG6-220ENST00000576218 TKFCQ3LXA3 575 aa17.85■□□□□ 0.45
SMG6-220ENST00000576218 RNF20Q5VTR2 975 aa17.85■□□□□ 0.45
SMG6-220ENST00000576218 TRERF1Q96PN7 1200 aa17.85■□□□□ 0.45
SMG6-220ENST00000576218 LSG1Q9H089 658 aaKnown RBP17.85■□□□□ 0.45
SMG6-220ENST00000576218 MSCO60682 206 aa17.84■□□□□ 0.45
SMG6-220ENST00000576218 WTAPQ15007 396 aa17.84■□□□□ 0.45
SMG6-220ENST00000576218 ASPRV1Q53RT3 343 aa17.84■□□□□ 0.45
SMG6-220ENST00000576218 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
SMG6-220ENST00000576218 HTATIP2Q9BUP3 242 aa17.84■□□□□ 0.45
SMG6-220ENST00000576218 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
SMG6-220ENST00000576218 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.44
SMG6-220ENST00000576218 ICAM1P05362 532 aa17.83■□□□□ 0.44
SMG6-220ENST00000576218 TMEM67Q5HYA8 995 aa17.83■□□□□ 0.44
SMG6-220ENST00000576218 BTNL9Q6UXG8 535 aa17.83■□□□□ 0.44
SMG6-220ENST00000576218 NSMFQ6X4W1 530 aa17.83■□□□□ 0.44
SMG6-220ENST00000576218 CHST3Q7LGC8 479 aa17.83■□□□□ 0.44
SMG6-220ENST00000576218 ANKS1AQ92625 1134 aa17.83■□□□□ 0.44
SMG6-220ENST00000576218 DPF3Q92784 378 aa17.83■□□□□ 0.44
SMG6-220ENST00000576218 RANBP17Q9H2T7 1088 aaKnown RBP17.83■□□□□ 0.44
SMG6-220ENST00000576218 PNMA2Q9UL42 364 aa17.83■□□□□ 0.44
SMG6-220ENST00000576218 DIS3Q9Y2L1 958 aaKnown RBP17.83■□□□□ 0.44
SMG6-220ENST00000576218 PFASO15067 1338 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 POTEB2H3BUK9 544 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 SLC27A2O14975 620 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 ZNF792Q3KQV3 632 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 TINF2Q9BSI4 451 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 CRISPLD2Q9H0B8 497 aa17.82■□□□□ 0.44
SMG6-220ENST00000576218 DDX20Q9UHI6 824 aaKnown RBP17.82■□□□□ 0.44
SMG6-220ENST00000576218 ZNF536O15090 1300 aa17.81■□□□□ 0.44
SMG6-220ENST00000576218 CYBAP13498 195 aa17.81■□□□□ 0.44
SMG6-220ENST00000576218 STOX1Q6ZVD7 989 aa17.81■□□□□ 0.44
SMG6-220ENST00000576218 NECAB2Q7Z6G3 386 aa17.81■□□□□ 0.44
SMG6-220ENST00000576218 CATIPQ7Z7H3 387 aa17.81■□□□□ 0.44
SMG6-220ENST00000576218 ANKLE1Q8NAG6 615 aa17.81■□□□□ 0.44
SMG6-220ENST00000576218 TAF6LQ9Y6J9 622 aa17.81■□□□□ 0.44
SMG6-220ENST00000576218 PTPDC1A2A3K4 754 aa17.8■□□□□ 0.44
SMG6-220ENST00000576218 PRC1O43663 620 aa17.8■□□□□ 0.44
SMG6-220ENST00000576218 MCM5P33992 734 aa17.8■□□□□ 0.44
SMG6-220ENST00000576218 USH1GQ495M9 461 aa17.8■□□□□ 0.44
SMG6-220ENST00000576218 PRAMEF19Q5SWL8 479 aa17.8■□□□□ 0.44
SMG6-220ENST00000576218 PAWRQ96IZ0 340 aaKnown RBP17.8■□□□□ 0.44
SMG6-220ENST00000576218 CPVLQ9H3G5 476 aa17.8■□□□□ 0.44
SMG6-220ENST00000576218 VAT1LQ9HCJ6 419 aa17.8■□□□□ 0.44
SMG6-220ENST00000576218 ZHX1Q9UKY1 873 aaPredicted RBP17.8■□□□□ 0.44
SMG6-220ENST00000576218 PDE4DIPQ5VU43 2346 aa17.8■□□□□ 0.44
SMG6-220ENST00000576218 TAL1P17542 331 aaPredicted RBP17.79■□□□□ 0.44
SMG6-220ENST00000576218 SEC23AQ15436 765 aa17.79■□□□□ 0.44
SMG6-220ENST00000576218 CDC37Q16543 378 aaPredicted RBP17.79■□□□□ 0.44
SMG6-220ENST00000576218 MUM1L1Q5H9M0 696 aa17.79■□□□□ 0.44
SMG6-220ENST00000576218 ANO1Q5XXA6 986 aa17.79■□□□□ 0.44
SMG6-220ENST00000576218 MB21D2Q8IYB1 491 aaPredicted RBP17.79■□□□□ 0.44
SMG6-220ENST00000576218 MSL3Q8N5Y2 521 aaKnown RBP17.79■□□□□ 0.44
SMG6-220ENST00000576218 DIS3LQ8TF46 1054 aaKnown RBP17.79■□□□□ 0.44
SMG6-220ENST00000576218 NUP133Q8WUM0 1156 aa17.79■□□□□ 0.44
SMG6-220ENST00000576218 A1CFQ9NQ94 594 aaKnown RBP17.79■□□□□ 0.44
SMG6-220ENST00000576218 NRBP1Q9UHY1 535 aa17.79■□□□□ 0.44
SMG6-220ENST00000576218 OGDHLQ9ULD0 1010 aa17.79■□□□□ 0.44
SMG6-220ENST00000576218 ZNFX1Q9P2E3 1918 aaKnown RBP17.78■□□□□ 0.44
SMG6-220ENST00000576218 SYNGAP1Q96PV0 1343 aa17.78■□□□□ 0.44
SMG6-220ENST00000576218 PLXNA1Q9UIW2 1896 aa17.78■□□□□ 0.44
SMG6-220ENST00000576218 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
SMG6-220ENST00000576218 SEPT4O43236 478 aa17.78■□□□□ 0.44
SMG6-220ENST00000576218 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
SMG6-220ENST00000576218 TRPV1Q8NER1 839 aa17.78■□□□□ 0.44
SMG6-220ENST00000576218 C11orf49Q9H6J7 331 aa17.78■□□□□ 0.44
SMG6-220ENST00000576218 BRCA2P51587 3418 aa17.78■□□□□ 0.44
SMG6-220ENST00000576218 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
SMG6-220ENST00000576218 DNAJC25-GNG10A0A024R161 153 aa17.77■□□□□ 0.44
SMG6-220ENST00000576218 KLRF2D3W0D1 207 aa17.77■□□□□ 0.44
SMG6-220ENST00000576218 REC8O95072 547 aa17.77■□□□□ 0.44
SMG6-220ENST00000576218 RARBP10826 455 aa17.77■□□□□ 0.44
SMG6-220ENST00000576218 CNTN2Q02246 1040 aa17.77■□□□□ 0.44
SMG6-220ENST00000576218 NECTIN1Q15223 517 aa17.77■□□□□ 0.44
SMG6-220ENST00000576218 PRPF38BQ5VTL8 546 aaKnown RBP17.77■□□□□ 0.44
SMG6-220ENST00000576218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMG6-220ENST00000576218 ZNF467Q7Z7K2 595 aaPredicted RBP17.77■□□□□ 0.44
SMG6-220ENST00000576218 ASB14A6NK59 587 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 KBTBD13C9JR72 458 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 EVI5O60447 810 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 AKR1A1P14550 325 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 CALML3P27482 149 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 ANTXR2P58335 489 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 FGD1P98174 961 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 KRT32Q14532 448 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 LHX8Q68G74 356 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 RNF207Q6ZRF8 634 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 ARMCX2Q7L311 632 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 ARRDC4Q8NCT1 418 aa17.76■□□□□ 0.43
SMG6-220ENST00000576218 CTCFLQ8NI51 663 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms