RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 EVX2Q03828 476 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 CCDC178Q5BJE1 867 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 PAPD7Q5XG87 772 aaKnown RBP16.21■□□□□ 0.19
SCARF1-209ENST00000576012 LMTK3Q96Q04 1460 aa16.21■□□□□ 0.19
SCARF1-209ENST00000576012 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 GSG1L2A8MUP6 293 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 AKR1B10O60218 316 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 NMT2O60551 498 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 CIAO1O76071 339 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 CPP00450 1065 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 ARID5AQ03989 594 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 CSGALNACT2Q8N6G5 542 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 OR2W6PQ8NHA6 318 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 TTLL11Q8NHH1 800 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 DCAF5Q96JK2 942 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 MMRN2Q9H8L6 949 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 LRP2BPQ9P2M1 347 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
SCARF1-209ENST00000576012 HDLBPQ00341 1268 aaKnown RBP16.2■□□□□ 0.18
SCARF1-209ENST00000576012 SPAG1Q07617 926 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 IL17AQ16552 155 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 C8orf74Q6P047 294 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 SH3RF1Q7Z6J0 888 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 NOC3LQ8WTT2 800 aaKnown RBP16.2■□□□□ 0.18
SCARF1-209ENST00000576012 CABS1Q96KC9 395 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 CEP89Q96ST8 783 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 TUBGCP2Q9BSJ2 902 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 IFIH1Q9BYX4 1025 aaKnown RBP16.2■□□□□ 0.18
SCARF1-209ENST00000576012 EPB41L5Q9HCM4 733 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 RBM12Q9NTZ6 932 aaKnown RBP16.2■□□□□ 0.18
SCARF1-209ENST00000576012 ZNF263O14978 683 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 CFAP58Q5T655 872 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 CREG2Q8IUH2 290 aa16.2■□□□□ 0.18
SCARF1-209ENST00000576012 AENQ8WTP8 325 aaKnown RBP16.2■□□□□ 0.18
SCARF1-209ENST00000576012 CCDC196A0A1B0GTZ2 297 aa16.19■□□□□ 0.18
SCARF1-209ENST00000576012 OPA1O60313 960 aa16.19■□□□□ 0.18
SCARF1-209ENST00000576012 RPSAP08865 295 aaKnown RBP16.19■□□□□ 0.18
SCARF1-209ENST00000576012 SF3B2Q13435 895 aaKnown RBP16.19■□□□□ 0.18
SCARF1-209ENST00000576012 GRIPAP1Q4V328 841 aa16.19■□□□□ 0.18
SCARF1-209ENST00000576012 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
SCARF1-209ENST00000576012 SHOX2O60902 331 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-209ENST00000576012 CCDC172P0C7W6 258 aa16.19■□□□□ 0.18
SCARF1-209ENST00000576012 USP8P40818 1118 aa16.19■□□□□ 0.18
SCARF1-209ENST00000576012 HLTFQ14527 1009 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCARF1-209ENST00000576012 MSL3Q8N5Y2 521 aaKnown RBP16.19■□□□□ 0.18
SCARF1-209ENST00000576012 KRT23Q9C075 422 aa16.19■□□□□ 0.18
SCARF1-209ENST00000576012 SOS2Q07890 1332 aaPredicted RBP16.19■□□□□ 0.18
SCARF1-209ENST00000576012 C1orf167Q5SNV9 1468 aa16.19■□□□□ 0.18
SCARF1-209ENST00000576012 MMP14P50281 582 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 KLHL7Q8IXQ5 586 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 GPKOWQ92917 476 aaPredicted RBP eCLIP16.18■□□□□ 0.18
SCARF1-209ENST00000576012 ZNF335Q9H4Z2 1342 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-209ENST00000576012 RASSF7Q02833 373 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 NOC4LQ9BVI4 516 aaKnown RBP16.18■□□□□ 0.18
SCARF1-209ENST00000576012 LGALS16A8MUM7 142 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 TACC1O75410 805 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 GLI1P08151 1106 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 PDHBP11177 359 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 LSP1P33241 339 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 MAP3K12Q12852 859 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 PKN1Q16512 942 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 ZNF658Q5TYW1 1059 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-209ENST00000576012 DNAAF5Q86Y56 855 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCARF1-209ENST00000576012 SNX12Q9UMY4 172 aa16.18■□□□□ 0.18
SCARF1-209ENST00000576012 NWD2Q9ULI1 1742 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 TARSL2A2RTX5 802 aaKnown RBP16.17■□□□□ 0.18
SCARF1-209ENST00000576012 NUTM2BA6NNL0 878 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-209ENST00000576012 NUTM2EB1AL46 878 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-209ENST00000576012 FTCDO95954 541 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 BCAMP50895 628 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 RASGRF1Q13972 1273 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 TDRD12Q587J7 1177 aaKnown RBP16.17■□□□□ 0.18
SCARF1-209ENST00000576012 ODF2Q5BJF6 829 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 CCDC155Q8N6L0 562 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 N4BP2L2Q92802 583 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-209ENST00000576012 CCDC114Q96M63 670 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 OSBPL9Q96SU4 736 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 PLCD4Q9BRC7 762 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 NACAP1Q9BZK3 213 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 GOLGA8KD6RF30 607 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 EPHB6O15197 1021 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 MEFVO15553 781 aaPredicted RBP16.17■□□□□ 0.18
SCARF1-209ENST00000576012 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 TRIM14Q14142 442 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 UBE3CQ15386 1083 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 HLFQ16534 295 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 FAM47AQ5JRC9 791 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 CEP85LQ5SZL2 805 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
SCARF1-209ENST00000576012 NAA35Q5VZE5 725 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 KANSL2Q9H9L4 492 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 SLC24A3Q9HC58 644 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 CAPN11Q9UMQ6 739 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 LTN1O94822 1766 aa16.17■□□□□ 0.18
SCARF1-209ENST00000576012 WDR19Q8NEZ3 1342 aa16.16■□□□□ 0.18
SCARF1-209ENST00000576012 GTPBP6O43824 516 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-209ENST00000576012 EIF4A3P38919 411 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms