RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 ANKS1AQ92625 1134 aa23.19■■□□□ 1.3
SCARF1-208ENST00000574545 ISY1Q9ULR0 285 aaKnown RBP23.19■■□□□ 1.3
SCARF1-208ENST00000574545 KDM4AO75164 1064 aa23.18■■□□□ 1.3
SCARF1-208ENST00000574545 SNAI1O95863 264 aaPredicted RBP23.18■■□□□ 1.3
SCARF1-208ENST00000574545 SNAP25P60880 206 aa23.18■■□□□ 1.3
SCARF1-208ENST00000574545 IMMTQ16891 758 aaKnown RBP23.18■■□□□ 1.3
SCARF1-208ENST00000574545 TKFCQ3LXA3 575 aa23.18■■□□□ 1.3
SCARF1-208ENST00000574545 ANO1Q5XXA6 986 aa23.18■■□□□ 1.3
SCARF1-208ENST00000574545 ANKRD35Q8N283 1001 aa23.18■■□□□ 1.3
SCARF1-208ENST00000574545 ZKSCAN3Q9BRR0 538 aa23.18■■□□□ 1.3
SCARF1-208ENST00000574545 RANBP17Q9H2T7 1088 aaKnown RBP23.18■■□□□ 1.3
SCARF1-208ENST00000574545 ZSWIM5Q9P217 1185 aa23.18■■□□□ 1.3
SCARF1-208ENST00000574545 TRIOBPQ9H2D6 2365 aa23.18■■□□□ 1.3
SCARF1-208ENST00000574545 SYNGAP1Q96PV0 1343 aa23.17■■□□□ 1.3
SCARF1-208ENST00000574545 DNM1LO00429 736 aa23.17■■□□□ 1.3
SCARF1-208ENST00000574545 CCDC96Q2M329 555 aa23.17■■□□□ 1.3
SCARF1-208ENST00000574545 ACAD9Q9H845 621 aa23.17■■□□□ 1.3
SCARF1-208ENST00000574545 RNF146Q9NTX7 359 aa23.17■■□□□ 1.3
SCARF1-208ENST00000574545 DNAH12Q6ZR08 3092 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 B4E1Z4 1266 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 SLC16A2P36021 539 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 ZNF543Q08ER8 600 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 LRRC26Q2I0M4 334 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 SYDE2Q5VT97 1194 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 CCDC174Q6PII3 467 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 CHRDL2Q6WN34 429 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 FAM133AQ8N9E0 248 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 ARRDC4Q8NCT1 418 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 TRERF1Q96PN7 1200 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 A1CFQ9NQ94 594 aaKnown RBP23.16■■□□□ 1.3
SCARF1-208ENST00000574545 HOMER2Q9NSB8 354 aa23.16■■□□□ 1.3
SCARF1-208ENST00000574545 FRMPD2Q68DX3 1309 aaPredicted RBP23.15■■□□□ 1.3
SCARF1-208ENST00000574545 SGSM2O43147 1006 aa23.15■■□□□ 1.3
SCARF1-208ENST00000574545 ICAM1P05362 532 aa23.15■■□□□ 1.3
SCARF1-208ENST00000574545 PTH1RQ03431 593 aa23.15■■□□□ 1.3
SCARF1-208ENST00000574545 CCDC178Q5BJE1 867 aa23.15■■□□□ 1.3
SCARF1-208ENST00000574545 GJC2Q5T442 439 aaPredicted RBP23.15■■□□□ 1.3
SCARF1-208ENST00000574545 RUFY2Q8WXA3 655 aa23.15■■□□□ 1.3
SCARF1-208ENST00000574545 GPCPD1Q9NPB8 672 aa23.15■■□□□ 1.3
SCARF1-208ENST00000574545 ALAS1P13196 640 aa23.14■■□□□ 1.29
SCARF1-208ENST00000574545 CNTN2Q02246 1040 aa23.14■■□□□ 1.29
SCARF1-208ENST00000574545 MUM1L1Q5H9M0 696 aa23.14■■□□□ 1.29
SCARF1-208ENST00000574545 IQCA1Q86XH1 822 aa23.14■■□□□ 1.29
SCARF1-208ENST00000574545 C7orf61Q8IZ16 206 aa23.14■■□□□ 1.29
SCARF1-208ENST00000574545 ZSCAN10Q96SZ4 725 aaPredicted RBP23.14■■□□□ 1.29
SCARF1-208ENST00000574545 KRT23Q9C075 422 aa23.14■■□□□ 1.29
SCARF1-208ENST00000574545 SENP6Q9GZR1 1112 aaPredicted RBP23.14■■□□□ 1.29
SCARF1-208ENST00000574545 RBM27Q9P2N5 1060 aaKnown RBP23.14■■□□□ 1.29
SCARF1-208ENST00000574545 LRRC41Q15345 812 aa23.13■■□□□ 1.29
SCARF1-208ENST00000574545 ENAHQ8N8S7 591 aaPredicted RBP23.13■■□□□ 1.29
SCARF1-208ENST00000574545 KATNBL1Q9H079 304 aa23.13■■□□□ 1.29
SCARF1-208ENST00000574545 CNPY2Q9Y2B0 182 aa23.13■■□□□ 1.29
SCARF1-208ENST00000574545 SOWAHBA6NEL2 793 aa23.12■■□□□ 1.29
SCARF1-208ENST00000574545 CYP21A2P08686 494 aa23.12■■□□□ 1.29
SCARF1-208ENST00000574545 AKR1A1P14550 325 aa23.12■■□□□ 1.29
SCARF1-208ENST00000574545 PNMA1Q8ND90 353 aa23.12■■□□□ 1.29
SCARF1-208ENST00000574545 CNNM2Q9H8M5 875 aa23.12■■□□□ 1.29
SCARF1-208ENST00000574545 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.12■■□□□ 1.29
SCARF1-208ENST00000574545 CCPG1Q9ULG6 757 aa23.12■■□□□ 1.29
SCARF1-208ENST00000574545 ASTN1O14525 1302 aa23.11■■□□□ 1.29
SCARF1-208ENST00000574545 POTEB2H3BUK9 544 aa23.11■■□□□ 1.29
SCARF1-208ENST00000574545 RARBP10826 455 aa23.11■■□□□ 1.29
SCARF1-208ENST00000574545 ACVR2BQ13705 512 aa23.11■■□□□ 1.29
SCARF1-208ENST00000574545 GPATCH4Q5T3I0 446 aaKnown RBP23.11■■□□□ 1.29
SCARF1-208ENST00000574545 ABHD16BQ9H3Z7 469 aa23.11■■□□□ 1.29
SCARF1-208ENST00000574545 CYP39A1Q9NYL5 469 aa23.11■■□□□ 1.29
SCARF1-208ENST00000574545 ZMYND8Q9ULU4 1186 aaPredicted RBP23.11■■□□□ 1.29
SCARF1-208ENST00000574545 TNKSO95271 1327 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 LAMA3Q16787 3333 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 SZT2Q5T011 3432 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 ADAMTS4O75173 837 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 SEC23AQ15436 765 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 CYB5R4Q7L1T6 521 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 ARMCX2Q7L311 632 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 CCDC144CPQ8IYA2 1237 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 MAP4K1Q92918 833 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 GDF15Q99988 308 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 XPNPEP3Q9NQH7 507 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 TAF6LQ9Y6J9 622 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 MCM3APO60318 1980 aa23.1■■□□□ 1.29
SCARF1-208ENST00000574545 GOLGA8HP0CJ92 632 aa23.09■■□□□ 1.29
SCARF1-208ENST00000574545 FXR1P51114 621 aaKnown RBP eCLIP23.09■■□□□ 1.29
SCARF1-208ENST00000574545 CENPQQ7L2Z9 268 aaPredicted RBP23.09■■□□□ 1.29
SCARF1-208ENST00000574545 LENG1Q96BZ8 264 aaPredicted RBP23.09■■□□□ 1.29
SCARF1-208ENST00000574545 KAT14Q9H8E8 782 aa23.09■■□□□ 1.29
SCARF1-208ENST00000574545 FAM184BQ9ULE4 1060 aa23.09■■□□□ 1.29
SCARF1-208ENST00000574545 U3KPZ7 1027 aaPredicted RBP23.09■■□□□ 1.29
SCARF1-208ENST00000574545 KBTBD13C9JR72 458 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 ADCY6O43306 1168 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 PGK1P00558 417 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 ATN1P54259 1190 aaPredicted RBP23.08■■□□□ 1.29
SCARF1-208ENST00000574545 SNX17Q15036 470 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 SLC39A5Q6ZMH5 540 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 CLEC4DQ8WXI8 215 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 UBA5Q9GZZ9 404 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 CPVLQ9H3G5 476 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 ZHX1Q9UKY1 873 aaPredicted RBP23.08■■□□□ 1.29
SCARF1-208ENST00000574545 PHF24Q9UPV7 400 aa23.08■■□□□ 1.29
SCARF1-208ENST00000574545 WDR19Q8NEZ3 1342 aa23.08■■□□□ 1.28
SCARF1-208ENST00000574545 SYN1P17600 705 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms