RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 RPN1P04843 607 aaKnown RBP16.06■□□□□ 0.16
SMG6-215ENST00000574501 NR1D1P20393 614 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 IQCA1Q86XH1 822 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 MYCBPAPQ8TBZ2 947 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 IFT81Q8WYA0 676 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 NAPBQ9H115 298 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 NFU1Q9UMS0 254 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 TMEM94Q12767 1356 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 RASSF10A6NK89 507 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 E7EVH7 732 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 CARSP49589 748 aaKnown RBP16.06■□□□□ 0.16
SMG6-215ENST00000574501 GUCY2FP51841 1108 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 CFAP58Q5T655 872 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 C8orf74Q6P047 294 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 YTHDF3Q7Z739 585 aaKnown RBP16.06■□□□□ 0.16
SMG6-215ENST00000574501 FANCBQ8NB91 859 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 CAVIN3Q969G5 261 aa16.06■□□□□ 0.16
SMG6-215ENST00000574501 STRBPQ96SI9 672 aaKnown RBP16.06■□□□□ 0.16
SMG6-215ENST00000574501 PPANQ9NQ55 473 aaKnown RBP16.06■□□□□ 0.16
SMG6-215ENST00000574501 A0A1W2PQC6 194 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
SMG6-215ENST00000574501 PDE6AP16499 860 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 KRT2P35908 639 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 VAV2P52735 878 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 MFSD6Q6ZSS7 791 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 IFNL3Q8IZI9 196 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 RBM12Q9NTZ6 932 aaKnown RBP16.05■□□□□ 0.16
SMG6-215ENST00000574501 SLIT3O75094 1523 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 FRMD3A2A2Y4 597 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 TACC1O75410 805 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 CDR1P51861 262 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 PPP2R5AQ15172 486 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 AKNAD1Q5T1N1 836 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 TRIM58Q8NG06 486 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 MS4A14Q96JA4 679 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 CCDC114Q96M63 670 aa16.05■□□□□ 0.16
SMG6-215ENST00000574501 DDX20Q9UHI6 824 aaKnown RBP16.05■□□□□ 0.16
SMG6-215ENST00000574501 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.05■□□□□ 0.16
SMG6-215ENST00000574501 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
SMG6-215ENST00000574501 NUTM2BA6NNL0 878 aaPredicted RBP16.04■□□□□ 0.16
SMG6-215ENST00000574501 NUTM2EB1AL46 878 aaPredicted RBP16.04■□□□□ 0.16
SMG6-215ENST00000574501 GLI1P08151 1106 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 PAX7P23759 505 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 HPDP32754 393 aaPredicted RBP16.04■□□□□ 0.16
SMG6-215ENST00000574501 SPA17Q15506 151 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 SPRED3Q2MJR0 410 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 CCDC170Q8IYT3 715 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 KIRREL3Q8IZU9 778 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 IQCKQ8N0W5 287 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 TRIM47Q96LD4 638 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 CCDC42Q96M95 316 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 SCLT1Q96NL6 688 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 TACO1Q9BSH4 297 aaKnown RBP16.04■□□□□ 0.16
SMG6-215ENST00000574501 TTYH3Q9C0H2 523 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 MYH7P12883 1935 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 MDH1P40925 334 aaKnown RBP16.04■□□□□ 0.16
SMG6-215ENST00000574501 METTL24Q5JXM2 366 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 TTC38Q5R3I4 469 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 WLSQ5T9L3 541 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 ZNF654Q8IZM8 581 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 NLRP2Q9NX02 1062 aa16.04■□□□□ 0.16
SMG6-215ENST00000574501 MYH10P35580 1976 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 MYH13Q9UKX3 1938 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 ERICH2A1L162 156 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 PRKAB2O43741 272 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 DNA2P51530 1060 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 E2F5Q15329 346 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 UBE3CQ15386 1083 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 IL17AQ16552 155 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 TYW1BQ6NUM6 668 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 ZNF572Q7Z3I7 529 aaPredicted RBP16.03■□□□□ 0.16
SMG6-215ENST00000574501 FAM228AQ86W67 206 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 ANKRD13CQ8N6S4 541 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 PIK3R5Q8WYR1 880 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 IFIH1Q9BYX4 1025 aaKnown RBP16.03■□□□□ 0.16
SMG6-215ENST00000574501 ARMT1Q9H993 441 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 EPB41L5Q9HCM4 733 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 EXOC1Q9NV70 894 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 MAGEC2Q9UBF1 373 aaPredicted RBP16.03■□□□□ 0.16
SMG6-215ENST00000574501 PATL2C9JE40 543 aaKnown RBP16.03■□□□□ 0.16
SMG6-215ENST00000574501 ZPR1O75312 459 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 NEBLO76041 1014 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 DNM2P50570 870 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 GUCY2DQ02846 1103 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 TBC1D8BQ0IIM8 1120 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 PKN1Q16512 942 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 ADSSL1Q8N142 457 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 TUBGCP2Q9BSJ2 902 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 KRT23Q9C075 422 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 SH2D4AQ9H788 454 aa16.03■□□□□ 0.16
SMG6-215ENST00000574501 MBD4O95243 580 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 FAM107AO95990 144 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 SRGNP10124 158 aa16.02■□□□□ 0.16
SMG6-215ENST00000574501 EEF1GP26641 437 aaKnown RBP16.02■□□□□ 0.16
SMG6-215ENST00000574501 MCM7P33993 719 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms