RNA–Protein interactions for RNA: ENST00000574334.5

NUBP1-207, Transcript of nucleotide binding protein 1, humanhuman

TSL 3

Gene NUBP1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-207ENST00000574334 CNTN2Q02246 1040 aa14.9□□□□□ -0.02
NUBP1-207ENST00000574334 NMIQ13287 307 aaPredicted RBP14.9□□□□□ -0.02
NUBP1-207ENST00000574334 CHURC1Q8WUH1 139 aa14.9□□□□□ -0.02
NUBP1-207ENST00000574334 PDLIM7Q9NR12 457 aa14.9□□□□□ -0.02
NUBP1-207ENST00000574334 RNF146Q9NTX7 359 aa14.9□□□□□ -0.02
NUBP1-207ENST00000574334 NRBP1Q9UHY1 535 aa14.9□□□□□ -0.02
NUBP1-207ENST00000574334 TACC3Q9Y6A5 838 aa14.9□□□□□ -0.02
NUBP1-207ENST00000574334 DDX49Q9Y6V7 483 aaKnown RBP14.9□□□□□ -0.02
NUBP1-207ENST00000574334 SMCHD1A6NHR9 2005 aa14.9□□□□□ -0.02
NUBP1-207ENST00000574334 SALL3Q9BXA9 1300 aa14.9□□□□□ -0.02
NUBP1-207ENST00000574334 TRIM43BA6NCK2 446 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 MYADML2A6NDP7 307 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 SLC16A2P36021 539 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 ACVR2BQ13705 512 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 SHHQ15465 462 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 ZNF697Q5TEC3 545 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 ARMCX2Q7L311 632 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 FAM160B2Q86V87 743 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 CCDC144CPQ8IYA2 1237 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 CHST13Q8NET6 341 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 STAG1Q8WVM7 1258 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 TRIM43Q96BQ3 446 aaPredicted RBP14.89□□□□□ -0.03
NUBP1-207ENST00000574334 TRERF1Q96PN7 1200 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 ACAD9Q9H845 621 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 GPCPD1Q9NPB8 672 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 STARD7Q9NQZ5 370 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 IL17RBQ9NRM6 502 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 FBXO40Q9UH90 709 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 PHF24Q9UPV7 400 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 DNAH12Q6ZR08 3092 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 FRMPD2Q68DX3 1309 aaPredicted RBP14.89□□□□□ -0.03
NUBP1-207ENST00000574334 SYNGAP1Q96PV0 1343 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 CUL9Q8IWT3 2517 aa14.89□□□□□ -0.03
NUBP1-207ENST00000574334 DNAJC25-GNG10A0A024R161 153 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 ATP2A1O14983 1001 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 CLTBP09497 229 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 RAG1P15918 1043 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 KCNA10Q16322 511 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 MCMDC2Q4G0Z9 681 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 NSMFQ6X4W1 530 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 EEPD1Q7L9B9 569 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 ZNF589Q86UQ0 364 aaPredicted RBP14.88□□□□□ -0.03
NUBP1-207ENST00000574334 HELLSQ9NRZ9 838 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 TMEM39AQ9NV64 488 aa14.88□□□□□ -0.03
NUBP1-207ENST00000574334 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.88□□□□□ -0.03
NUBP1-207ENST00000574334 ADCY6O43306 1168 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 ADAMTS4O75173 837 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 ACLYP53396 1101 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 HDAC1Q13547 482 aaPredicted RBP14.87□□□□□ -0.03
NUBP1-207ENST00000574334 PPP4R3BQ5MIZ7 849 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 TTBK2Q6IQ55 1244 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 RCSD1Q6JBY9 416 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 GMCL1Q96IK5 515 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 CDX2Q99626 313 aaPredicted RBP14.87□□□□□ -0.03
NUBP1-207ENST00000574334 SPC25Q9HBM1 224 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 CCPG1Q9ULG6 757 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 PRR12Q9ULL5 1215 aa14.87□□□□□ -0.03
NUBP1-207ENST00000574334 SPTBN5Q9NRC6 3674 aaKnown RBP14.86□□□□□ -0.03
NUBP1-207ENST00000574334 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.86□□□□□ -0.03
NUBP1-207ENST00000574334 FGAP02671 866 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 PTGS1P23219 599 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 ITGB8P26012 769 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 OAZ1P54368 228 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 BEX3Q00994 111 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 SNX17Q15036 470 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 MUM1L1Q5H9M0 696 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 MAMDC4Q6UXC1 1216 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 MSL3Q8N5Y2 521 aaKnown RBP14.86□□□□□ -0.03
NUBP1-207ENST00000574334 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 NUP133Q8WUM0 1156 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 FGD4Q96M96 766 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 PURBQ96QR8 312 aaKnown RBP14.86□□□□□ -0.03
NUBP1-207ENST00000574334 TTYH1Q9H313 450 aaPredicted RBP14.86□□□□□ -0.03
NUBP1-207ENST00000574334 RWDD1Q9H446 243 aaPredicted RBP14.86□□□□□ -0.03
NUBP1-207ENST00000574334 A1CFQ9NQ94 594 aaKnown RBP14.86□□□□□ -0.03
NUBP1-207ENST00000574334 SYNPO2Q9UMS6 1093 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 EYSQ5T1H1 3165 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 ZNF536O15090 1300 aa14.86□□□□□ -0.03
NUBP1-207ENST00000574334 SOWAHBA6NEL2 793 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 DCDC2CA8MYV0 355 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 DUSP11O75319 330 aaKnown RBP14.85□□□□□ -0.03
NUBP1-207ENST00000574334 ASGR1P07306 291 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 HSPD1P10809 573 aaKnown RBP14.85□□□□□ -0.03
NUBP1-207ENST00000574334 GNASQ5JWF2 1037 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 ZNF467Q7Z7K2 595 aaPredicted RBP14.85□□□□□ -0.03
NUBP1-207ENST00000574334 MYLIPQ8WY64 445 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 GLT1D1Q96MS3 346 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 ZKSCAN3Q9BRR0 538 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 ABHD16BQ9H3Z7 469 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 MCM3APO60318 1980 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 CCDC171Q6TFL3 1326 aa14.85□□□□□ -0.03
NUBP1-207ENST00000574334 PTPDC1A2A3K4 754 aa14.84□□□□□ -0.03
NUBP1-207ENST00000574334 IGHDP01880 384 aa14.84□□□□□ -0.03
NUBP1-207ENST00000574334 FDX1P10109 184 aa14.84□□□□□ -0.03
NUBP1-207ENST00000574334 TNFAIP2Q03169 654 aa14.84□□□□□ -0.03
NUBP1-207ENST00000574334 CWC27Q6UX04 472 aaKnown RBP14.84□□□□□ -0.03
NUBP1-207ENST00000574334 FBXO16Q8IX29 292 aaPredicted RBP14.84□□□□□ -0.03
NUBP1-207ENST00000574334 MAFAQ8NHW3 353 aaPredicted RBP14.84□□□□□ -0.03
NUBP1-207ENST00000574334 DCAF4Q8WV16 495 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms